HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 6 matching records:

Displaying record number 60505

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HXB2 Location Gag(77-85)
p17(77-85)
DNA(1018..1044)
Gag Epitope Map
Author Location p17
Epitope SLYNTVATL Epitope Alignment
SLYNTVATL epitope logo
Show epitope variants
Epitope Name A2-SL9
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA ACS 19957: A*01, A*02, B*08:01, B*15; ACS 19885: A*01, A*02, B*08:01, B*27; ACS 19861: A*01, A*02, B*08:01, B*51; ACS 19453: A*01, A*02, B*08:01, B*38; ACS 19342: A*01, A*02, B*08:01, B*40; ACS 18840: A*02, B*08:01, B*27; ACS 18839: A*02:07, B*08:01, B*27; ACS 18785: A*01, A*02, B*07, B*08:01
Country Netherlands
Experimental methods Other, Tetramer binding
Keywords TCR usage

Notes

References

Costa2015 Ana I. Costa, Dan Koning, Kristin Ladell, James E. McLaren, Bart P. X. Grady, Ingrid M. M. Schellens, Petra van Ham, Monique Nijhuis, José A. M. Borghans, Can Keşmir, David A. Price, and Debbie van Baarle. Complex T-Cell Receptor Repertoire Dynamics Underlie the CD8+ T-Cell Response to HIV-1. J. Virol., 89(1):110-119, Jan 2015. PubMed ID: 25320304. Show all entries for this paper.


Displaying record number 60506

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HXB2 Location Gag(260-267)
p24(128-135)
DNA(1567..1590)
Gag Epitope Map
Author Location p24
Epitope EIYKRWII Epitope Alignment
EIYKRWII epitope logo
Show epitope variants
Epitope Name B8-EI8
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA ACS 19957: A*01, A*02, B*08:01, B*15; ACS 19885: A*01, A*02, B*08:01, B*27; ACS 19861: A*01, A*02, B*08:01, B*51; ACS 19453: A*01, A*02, B*08:01, B*38; ACS 19342: A*01, A*02, B*08:01, B*40; ACS 18840: A*02, B*08:01, B*27; ACS 18839: A*02:07, B*08:01, B*27; ACS 18785: A*01, A*02, B*07, B*08:01
Country Netherlands
Experimental methods Other, Tetramer binding
Keywords TCR usage

Notes

References

Costa2015 Ana I. Costa, Dan Koning, Kristin Ladell, James E. McLaren, Bart P. X. Grady, Ingrid M. M. Schellens, Petra van Ham, Monique Nijhuis, José A. M. Borghans, Can Keşmir, David A. Price, and Debbie van Baarle. Complex T-Cell Receptor Repertoire Dynamics Underlie the CD8+ T-Cell Response to HIV-1. J. Virol., 89(1):110-119, Jan 2015. PubMed ID: 25320304. Show all entries for this paper.


Displaying record number 63217

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HXB2 Location Gag(260-267)
p24(128-135)
Gag Epitope Map
Author Location  
Epitope EIYKRWII Epitope Alignment
EIYKRWII epitope logo
Species (MHC/HLA) human
Immunogen computer prediction
Experimental methods Other
Keywords assay or method development

Notes

References

Costa2015 Ana I. Costa, Dan Koning, Kristin Ladell, James E. McLaren, Bart P. X. Grady, Ingrid M. M. Schellens, Petra van Ham, Monique Nijhuis, José A. M. Borghans, Can Keşmir, David A. Price, and Debbie van Baarle. Complex T-Cell Receptor Repertoire Dynamics Underlie the CD8+ T-Cell Response to HIV-1. J. Virol., 89(1):110-119, Jan 2015. PubMed ID: 25320304. Show all entries for this paper.

DeNeuter2018 Nicolas De Neuter, Wout Bittremieux, Charlie Beirnaert, Bart Cuypers, Aida Mrzic, Pieter Moris, Arvid Suls, Viggo Van Tendeloo, Benson Ogunjimi, Kris Laukens, and Pieter Meysman. On the feasibility of mining CD8+ T cell receptor patterns underlying immunogenic peptide recognition. Immunogenetics, 70(3):159-168 doi, Mar 2018. PubMed ID: 28779185 Show all entries for this paper.


Displaying record number 60508

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HXB2 Location Gag(263-272)
p24(131-140)
DNA(1576..1605)
Gag Epitope Map
Author Location p24
Epitope KRWIILGLNK Epitope Alignment
KRWIILGLNK epitope logo
Show epitope variants
Epitope Name B27-KK10
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA ACS 19957: A*01, A*02, B*08:01, B*15; ACS 19885: A*01, A*02, B*08:01, B*27; ACS 19861: A*01, A*02, B*08:01, B*51; ACS 19453: A*01, A*02, B*08:01, B*38; ACS 19342: A*01, A*02, B*08:01, B*40; ACS 18840: A*02, B*08:01, B*27; ACS 18839: A*02:07, B*08:01, B*27; ACS 18785: A*01, A*02, B*07, B*08:01
Country Netherlands
Experimental methods Other, Tetramer binding
Keywords TCR usage

Notes

References

Costa2015 Ana I. Costa, Dan Koning, Kristin Ladell, James E. McLaren, Bart P. X. Grady, Ingrid M. M. Schellens, Petra van Ham, Monique Nijhuis, José A. M. Borghans, Can Keşmir, David A. Price, and Debbie van Baarle. Complex T-Cell Receptor Repertoire Dynamics Underlie the CD8+ T-Cell Response to HIV-1. J. Virol., 89(1):110-119, Jan 2015. PubMed ID: 25320304. Show all entries for this paper.


Displaying record number 60507

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HXB2 Location Nef(90-97)
DNA(9064..9087)
Nef Epitope Map
Author Location Nef
Epitope FLKEKGGL Epitope Alignment
FLKEKGGL epitope logo
Show epitope variants
Epitope Name B8-FL8
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA ACS 19957: A*01, A*02, B*08:01, B*15; ACS 19885: A*01, A*02, B*08:01, B*27; ACS 19861: A*01, A*02, B*08:01, B*51; ACS 19453: A*01, A*02, B*08:01, B*38; ACS 19342: A*01, A*02, B*08:01, B*40; ACS 18840: A*02, B*08:01, B*27; ACS 18839: A*02:07, B*08:01, B*27; ACS 18785: A*01, A*02, B*07, B*08:01
Country Netherlands
Experimental methods Other, Tetramer binding
Keywords TCR usage

Notes

References

Costa2015 Ana I. Costa, Dan Koning, Kristin Ladell, James E. McLaren, Bart P. X. Grady, Ingrid M. M. Schellens, Petra van Ham, Monique Nijhuis, José A. M. Borghans, Can Keşmir, David A. Price, and Debbie van Baarle. Complex T-Cell Receptor Repertoire Dynamics Underlie the CD8+ T-Cell Response to HIV-1. J. Virol., 89(1):110-119, Jan 2015. PubMed ID: 25320304. Show all entries for this paper.


Displaying record number 63216

Download this epitope record as JSON.

HXB2 Location Nef(90-97) Nef Epitope Map
Author Location  
Epitope FLKEKGGL Epitope Alignment
FLKEKGGL epitope logo
Species (MHC/HLA) human
Immunogen computer prediction
Experimental methods Other
Keywords assay or method development

Notes

References

Costa2015 Ana I. Costa, Dan Koning, Kristin Ladell, James E. McLaren, Bart P. X. Grady, Ingrid M. M. Schellens, Petra van Ham, Monique Nijhuis, José A. M. Borghans, Can Keşmir, David A. Price, and Debbie van Baarle. Complex T-Cell Receptor Repertoire Dynamics Underlie the CD8+ T-Cell Response to HIV-1. J. Virol., 89(1):110-119, Jan 2015. PubMed ID: 25320304. Show all entries for this paper.

DeNeuter2018 Nicolas De Neuter, Wout Bittremieux, Charlie Beirnaert, Bart Cuypers, Aida Mrzic, Pieter Moris, Arvid Suls, Viggo Van Tendeloo, Benson Ogunjimi, Kris Laukens, and Pieter Meysman. On the feasibility of mining CD8+ T cell receptor patterns underlying immunogenic peptide recognition. Immunogenetics, 70(3):159-168 doi, Mar 2018. PubMed ID: 28779185 Show all entries for this paper.


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