HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 33 matching records:

Displaying record number 57875

HXB2 Location Gag(20-29)
p17(20-29)
DNA(847..876)
Gag Epitope Map
Author Location p17
Epitope RLRPGGKKHY Epitope Alignment
RLRPGGKKHY epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human(B*4201)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, escape, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57877

HXB2 Location Gag(76-86)
p17(76-86)
DNA(1015..1047)
Gag Epitope Map
Author Location p17
Epitope RSLYNTVATLY Epitope Alignment
RSLYNTVATLY epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human(A*3002)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57885

HXB2 Location Gag(162-172)
p24(30-40)
DNA(1273..1305)
Gag Epitope Map
Author Location p24
Epitope KAFSPEVIPMF Epitope Alignment
KAFSPEVIPMF epitope logo
Epitope Name KF11
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0205, A*2601, B*0705, B*5801, Cw*0701, Cw*0702
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57873

HXB2 Location Gag(240-249)
p24(108-117)
DNA(1507..1536)
Gag Epitope Map
Author Location p24
Epitope TSTLQEQIAW Epitope Alignment
TSTLQEQIAW epitope logo
Show epitope variants
Epitope Name TW10
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, escape, acute/early infection, compensatory mutation

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57894

HXB2 Location Gag(329-337)
p24(197-205)
DNA(1774..1800)
Gag Epitope Map
Author Location p24
Epitope DCKTILRAL Epitope Alignment
DCKTILRAL epitope logo
Subtype C
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0301, A*3002, B*0801, B*5801, Cw*0701, Cw*0701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57901

HXB2 Location Gag(401-409)
p2p7p1p6(38-46)
DNA(1990..2016)
Gag Epitope Map
Author Location p24
Epitope IARNCRAPR Epitope Alignment
IARNCRAPR epitope logo
Subtype C
Species (MHC/HLA) human(A*3001)
Immunogen HIV-1 infection
Patient MHC/HLA A*0201, A*3001, B*4201, B*5801, Cw*0302, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57879

HXB2 Location Gag(454-465)
p2p7p1p6(91-102)
DNA(2149..2184)
Gag Epitope Map
Author Location p2p7p1p6
Epitope EPTAPPAESFRF Epitope Alignment
EPTAPPAESFRF epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0202, A*2901, B*1503, B*5801, Cw*0210, Cw*0602
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57883

HXB2 Location Pol(399-407)
RT(244-252)
DNA(3279..3305)
Pol Epitope Map
Author Location RT
Epitope IQLPEKDSW Epitope Alignment
IQLPEKDSW epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0123, A*0123, B*5801, B*5801, Cw*0602, Cw*0602
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57887

HXB2 Location Pol(399-407)
RT(244-252)
DNA(3279..3305)
Pol Epitope Map
Author Location RT
Epitope IVLPEKESW Epitope Alignment
IVLPEKESW epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0123, A*2902, B*4201, B*5801, Cw*0602, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57903

HXB2 Location Pol(512-520)
RT(357-365)
DNA(3618..3644)
Pol Epitope Map
Author Location RT
Epitope RRTTHTNDV Epitope Alignment
RRTTHTNDV epitope logo
Subtype C
Species (MHC/HLA) human(A*3001)
Immunogen HIV-1 infection
Patient MHC/HLA A*0201, A*3001, B*4201, B*5801, Cw*0302, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57904

HXB2 Location Pol(838-847)
Integrase(123-132)
DNA(4596..4625)
Pol Epitope Map
Author Location Integrase
Epitope SAAVKAACWW Epitope Alignment
SAAVKAACWW epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0201, A*3001, B*4201, B*5801, Cw*0302, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57896

HXB2 Location Pol(838-847)
Integrase(123-132)
DNA(4596..4625)
Pol Epitope Map
Author Location Integrase
Epitope SAAVKAACWW Epitope Alignment
SAAVKAACWW epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0301, A*3002, B*0801, B*5801, Cw*0701, Cw*0701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57880

HXB2 Location Pol(850-861)
Integrase(135-146)
DNA(4632..4667)
Pol Epitope Map
Author Location Integrase
Epitope IQQEFGIPYNPQ Epitope Alignment
IQQEFGIPYNPQ epitope logo
Subtype C
Species (MHC/HLA) human(B*1503)
Immunogen HIV-1 infection
Patient MHC/HLA A*0202, A*2901, B*1503, B*5801, Cw*0210, Cw*0602
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57881

HXB2 Location Pol(888-896)
Integrase(173-181)
DNA(4746..4772)
Pol Epitope Map
Author Location Integrase
Epitope KTAVQMAVF Epitope Alignment
KTAVQMAVF epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57890

HXB2 Location Pol(888-896)
Integrase(173-181)
DNA(4746..4772)
Pol Epitope Map
Author Location Integrase
Epitope KTAVQMAVF Epitope Alignment
KTAVQMAVF epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0205, A*2601, B*0705, B*5801, Cw*0701, Cw*0702
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57905

HXB2 Location Pol(975-983)
Integrase(260-268)
DNA(5007..5033)
Pol Epitope Map
Author Location Integrase
Epitope VPRRKVKII Epitope Alignment
VPRRKVKII epitope logo
Subtype C
Species (MHC/HLA) human(B*4201)
Immunogen HIV-1 infection
Patient MHC/HLA A*0201, A*3001, B*4201, B*5801, Cw*0302, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57882

HXB2 Location Vif(166-174)
DNA(5536..5562)
Vif Epitope Map
Author Location Vif
Epitope VRKLVEDRW Epitope Alignment
VRKLVEDRW epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0202, A*2901, B*1503, B*5801, Cw*0210, Cw*0602
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57891

HXB2 Location Vpr(30-38)
DNA(5646..5672)
Vpr Epitope Map
Author Location Vpr
Epitope AVRHFPRPW Epitope Alignment
AVRHFPRPW epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0205, A*2601, B*0705, B*5801, Cw*0701, Cw*0702
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57888

HXB2 Location Vpr(34-42)
DNA(5658..5684)
Vpr Epitope Map
Author Location RT
Epitope FPRPWLHGL Epitope Alignment
FPRPWLHGL epitope logo
Subtype C
Species (MHC/HLA) human(B*4201)
Immunogen HIV-1 infection
Patient MHC/HLA A*0123, A*2902, B*4201, B*5801, Cw*0602, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57884

HXB2 Location Tat(2-11)
DNA(5834..5863)
Tat Epitope Map
Author Location Tat
Epitope EPIDPNLEPW Epitope Alignment
EPIDPNLEPW epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0123, A*0123, B*5801, B*5801, Cw*0602, Cw*0602
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57897

HXB2 Location Rev(29-46)
DNA(8387..8440)
Rev Epitope Map
Author Location Tat
Epitope PKPEGTRQARKNRRRRWR Epitope Alignment
PKPEGTRQARKNRRRRWR epitope logo
Subtype C
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA A*0301, A*3002, B*0801, B*5801, Cw*0701, Cw*0701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57906

HXB2 Location Rev(33-41)
DNA(8399..8425)
Rev Epitope Map
Author Location Tat
Epitope GTRQARKNR Epitope Alignment
GTRQARKNR epitope logo
Subtype C
Species (MHC/HLA) human(A*3001)
Immunogen HIV-1 infection
Patient MHC/HLA A*0201, A*3001, B*4201, B*5801, Cw*0302, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57899

HXB2 Location gp160(810-818)
gp41(299-307)
DNA(8652..8678)
gp160 Epitope Map
Author Location Env
Epitope SAISLLDTI Epitope Alignment
SAISLLDTI epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0301, A*3002, B*0801, B*5801, Cw*0701, Cw*0701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57907

HXB2 Location gp160(814-822)
gp41(303-311)
DNA(8664..8690)
gp160 Epitope Map
Author Location Env
Epitope LLDTIAIAV Epitope Alignment
LLDTIAIAV epitope logo
Subtype C
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA A*0201, A*3001, B*4201, B*5801, Cw*0302, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57889

HXB2 Location gp160(843-851)
gp41(332-340)
DNA(8751..8777)
gp160 Epitope Map
Author Location Env
Epitope IPRRIRQGF Epitope Alignment
IPRRIRQGF epitope logo
Subtype C
Species (MHC/HLA) human(B*4201)
Immunogen HIV-1 infection
Patient MHC/HLA A*0123, A*2902, B*4201, B*5801, Cw*0602, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57878

HXB2 Location Nef(13-20)
DNA(8833..8856)
Nef Epitope Map
Author Location Nef
Epitope WPAVRERI Epitope Alignment
WPAVRERI epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human(B*0801)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57892

HXB2 Location Nef(29-37)
DNA(8881..8907)
Nef Epitope Map
Author Location Nef
Epitope GVGAASQDL Epitope Alignment
GVGAASQDL epitope logo
Subtype C
Species (MHC/HLA) human(A*0205)
Immunogen HIV-1 infection
Patient MHC/HLA A*0205, A*2601, B*0705, B*5801, Cw*0701, Cw*0702
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57908

HXB2 Location Nef(42-50)
DNA(8920..8946)
Nef Epitope Map
Author Location Nef
Epitope ALTSSNTAH Epitope Alignment
ALTSSNTAH epitope logo
Subtype C
Species (MHC/HLA) human(A*0201)
Immunogen HIV-1 infection
Patient MHC/HLA A*0201, A*3001, B*4201, B*5801, Cw*0302, Cw*1701
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57876

HXB2 Location Nef(71-79)
DNA(9007..9033)
Nef Epitope Map
Author Location Nef
Epitope RPQVPLRPM Epitope Alignment
RPQVPLRPM epitope logo
Show epitope variants
Subtype C
Species (MHC/HLA) human(B*0702)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57874

HXB2 Location Nef(82-90)
DNA(9040..9066)
Nef Epitope Map
Author Location Nef
Epitope KAAFDLSFF Epitope Alignment
KAAFDLSFF epitope logo
Show epitope variants
Epitope Name KF9
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, escape, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57893

HXB2 Location Nef(104-115)
DNA(9106..9141)
Nef Epitope Map
Author Location Nef
Epitope KRRQDILDLWVY Epitope Alignment
KRRQDILDLWVY epitope logo
Subtype C
Species (MHC/HLA) human(CW*0702, Cw*0701)
Immunogen HIV-1 infection
Patient MHC/HLA A*0205, A*2601, B*0705, B*5801, Cw*0701, Cw*0702
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57909

HXB2 Location Nef(127-135)
DNA(9175..9201)
Nef Epitope Map
Author Location Nef
Epitope YTPGPGVRY Epitope Alignment
YTPGPGVRY epitope logo
Subtype C
Species (MHC/HLA) human(B*5801)
Immunogen HIV-1 infection
Patient MHC/HLA A*0123, A*0123, B*5801, B*5801, Cw*0602, Cw*0602
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


Displaying record number 57886

HXB2 Location Nef(183-191)
DNA(9343..9369)
Nef Epitope Map
Author Location Nef
Epitope WVFDSSLAR Epitope Alignment
WVFDSSLAR epitope logo
Subtype C
Species (MHC/HLA) human(A*0123)
Immunogen HIV-1 infection
Patient MHC/HLA A*0123, A*0123, B*5801, B*5801, Cw*0602, Cw*0602
Country South Africa
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords rate of progression, acute/early infection

Notes

References

Chopera2011 D. R. Chopera, M. Mlotshwa, Z. Woodman, K. Mlisana, D. de Assis Rosa, D. P. Martin, S. Abdool Karim, C. M. Gray, C. Williamson, and CAPRISA 002 Study Team. Virological and Immunological Factors Associated with HIV-1 Differential Disease Progression in HLA-B*58:01-Positive Individuals. J. Virol., 85(14):7070-7080, Jul 2011. PubMed ID: 21613398. Show all entries for this paper.


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