HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 39 matching records:

Displaying record number 52621

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HXB2 Location Gag(20-28)
p17(20-28)
DNA(847..873)
Gag Epitope Map
Author Location p17(20-28)
Epitope RLRPGGKKK Epitope Alignment
RLRPGGKKK epitope logo
Subtype B
Species (MHC/HLA) human(A3)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A3, B44, B57, Cw5, Cw6; A1, A3, B14, B7, C*07:02, C*08:02; A1, A3, B35, B8; A1, A3, B62, B8, Cw3, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52649

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HXB2 Location Gag(77-85)
p17(77-85)
DNA(1018..1044)
Gag Epitope Map
Author Location p17(77-85)
Epitope SLYNTVATL Epitope Alignment
SLYNTVATL epitope logo
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A11, B51, B61, C*14, Cw2
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52622

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HXB2 Location Gag(162-172)
p24(30-40)
DNA(1273..1305)
Gag Epitope Map
Author Location p24(30-40)
Epitope KAFSPEVIPMF Epitope Alignment
KAFSPEVIPMF epitope logo
Subtype B
Species (MHC/HLA) human(B57)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A3, B44, B57, Cw5, Cw6
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52619

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HXB2 Location Gag(240-249)
p24(108-117)
DNA(1507..1536)
Gag Epitope Map
Author Location p24(108-117)
Epitope TSTLQEQIGW Epitope Alignment
TSTLQEQIGW epitope logo
Species (MHC/HLA) human(B*57, B*58)
Immunogen HIV-1 infection
Patient MHC/HLA A*01, A*26, B*35, B*57, C*04, C*06:02:01:01; A*01, A*30, B*42, B*52, C*07, C*17; A*01, A*02:01, B*44, B*57, C*05, C*06
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins, HLA cross-presentation

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52645

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HXB2 Location Gag(269-277)
p24(137-145)
DNA(1594..1620)
Gag Epitope Map
Author Location p24(137-145)
Epitope GLNKIVRMY Epitope Alignment
GLNKIVRMY epitope logo
Subtype B
Species (MHC/HLA) human(B62)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A3, B62, B8, Cw3, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52623

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HXB2 Location Gag(298-306)
p24(166-174)
DNA(1681..1707)
Gag Epitope Map
Author Location p24(166-174)
Epitope DRFYKTLRA Epitope Alignment
DRFYKTLRA epitope logo
Subtype B
Species (MHC/HLA) human(B14)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A3, B14, B7, C*07:02, C*08:02; A1, A1, B14, B8, Cw7, Cw8
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52650

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HXB2 Location Gag(426-434)
p2p7p1p6(63-71)
DNA(2065..2091)
Gag Epitope Map
Author Location p15(63-71)
Epitope CTERQANFL Epitope Alignment
CTERQANFL epitope logo
Species (MHC/HLA) human(B61)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A11, B51, B61, C*14, Cw2
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52615

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HXB2 Location Pol(273-282)
RT(118-127)
DNA(2901..2930)
Pol Epitope Map
Author Location RT(118-127)
Epitope VPLDEDFRKY Epitope Alignment
VPLDEDFRKY epitope logo
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA A*23:01, B*15:03, B*35:01, Cw2, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52648

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HXB2 Location Pol(283-290)
RT(128-135)
DNA(2931..2954)
Pol Epitope Map
Author Location RT(128-135)
Epitope TAFTIPSI Epitope Alignment
TAFTIPSI epitope logo
Subtype B
Species (MHC/HLA) human(B51)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A11, B51, B61, C*14, Cw2
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52616

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HXB2 Location Pol(330-338)
RT(175-183)
DNA(3072..3098)
Pol Epitope Map
Author Location RT(175-183)
Epitope NPDIVIYQY Epitope Alignment
NPDIVIYQY epitope logo
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA A*23:01, B*15:03, B*35:01, Cw2, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52617

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HXB2 Location Pol(978-986)
Integrase(263-271)
DNA(5016..5042)
Pol Epitope Map
Author Location Integrase(263-271)
Epitope RKAKIIRDY Epitope Alignment
RKAKIIRDY epitope logo
Subtype B
Species (MHC/HLA) human(B*15:03)
Immunogen HIV-1 infection
Patient MHC/HLA A*23:01, B*15:03, B*35:01, Cw2, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52633

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HXB2 Location Vif(127-135)
DNA(5419..5445)
Vif Epitope Map
Author Location Vif(125-135)
Epitope HIVSPRCEY Epitope Alignment
HIVSPRCEY epitope logo
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA 1261: A*02:01, A29, B58, B62, C*03:04, C*16:01
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52641

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HXB2 Location Vpr(29-37)
DNA(5643..5669)
Vpr Epitope Map
Author Location Vpr(29-37 B)
Epitope EAVRHFPRI Epitope Alignment
EAVRHFPRI epitope logo
Species (MHC/HLA) human(B51)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A*25:01, B18, B51, C*01:02, C*12:03
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52626

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HXB2 Location Vpr(53-63)
DNA(5715..5747)
Vpr Epitope Map
Author Location Vpr(53-63)
Epitope TWAVEAIIRI Epitope Alignment
TWAVEAIIRI epitope logo
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA A1, A3, B14, B7, C*07:02, C*08:02
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52642

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HXB2 Location Vpr(59-67)
DNA(5733..5759)
Vpr Epitope Map
Author Location Vpr(59-67)
Epitope AIIRILQQL Epitope Alignment
AIIRILQQL epitope logo
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A32, B49, B51, Cw1, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52639

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HXB2 Location Tat(30-37)
DNA(5918..5941)
Tat Epitope Map
Author Location Tat(30-37)
Epitope CCFHCQVC Epitope Alignment
CCFHCQVC epitope logo
Species (MHC/HLA) human(C*12:03)
Immunogen HIV-1 infection
Patient MHC/HLA A26, A3, B*38:01, B7, C*07:02, C*12:03; A*02:01, A*25:01, B18, B51, C*01:02, C*12:03
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early treatment

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52640

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HXB2 Location Tat(30-37)
DNA(5918..5941)
Tat Epitope Map
Author Location Tat(30-37)
Epitope CCFHCQVC Epitope Alignment
CCFHCQVC epitope logo
Species (MHC/HLA) human(C*12:03)
Immunogen HIV-1 infection
Patient MHC/HLA A26, A3, B*38:01, B7, C*07:02, C*12:03; A*02:01, A*25:01, B18, B51, C*01:02, C*12:03
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early treatment

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52643

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HXB2 Location Rev(67-75)
DNA(8501..8527)
Rev Epitope Map
Author Location Rev(67-75)
Epitope SAEPVPLQL Epitope Alignment
SAEPVPLQL epitope logo
Species (MHC/HLA) human(Cw5)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A1, B44, B57, Cw5, Cw6
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52627

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HXB2 Location gp160(78-86)
gp120(78-86)
DNA(6456..6482)
gp160 Epitope Map
Author Location gp120(78-86)
Epitope DPNPQEVVL Epitope Alignment
DPNPQEVVL epitope logo
Subtype B
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A3, A33, B14, B35, C*04:01, C*08:02
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52647

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HXB2 Location gp160(104-112)
gp120(104-112)
DNA(6534..6560)
gp160 Epitope Map
Author Location gp120(104-112)
Epitope MHEDIISLW Epitope Alignment
MHEDIISLW epitope logo
Species (MHC/HLA) human(B*38:01)
Immunogen HIV-1 infection
Patient MHC/HLA A26, A3, B*38:01, B7, C*07:02, C*12:03
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52631

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HXB2 Location gp160(209-217)
gp120(209-217)
DNA(6849..6875)
gp160 Epitope Map
Author Location gp120(209-217)
Epitope SFEPIPIHY Epitope Alignment
SFEPIPIHY epitope logo
Species (MHC/HLA) human(A29)
Immunogen HIV-1 infection
Patient MHC/HLA 1168: A*02:01, A29, B44, B60, C*16, Cw3
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52636

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HXB2 Location gp160(584-594)
gp41(73-83)
DNA(7974..8006)
gp160 Epitope Map
Author Location gp41(584-594)
Epitope ERYLKDQQLLG Epitope Alignment
ERYLKDQQLLG epitope logo
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA A1, A1, B14, B8, Cw7, Cw8
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52613

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HXB2 Location gp160(585-593)
gp41(74-82)
DNA(7977..8003)
gp160 Epitope Map
Author Location gp41(585-593)
Epitope RYLKDQQLL Epitope Alignment
RYLKDQQLL epitope logo
Species (MHC/HLA) human(A*23:01)
Immunogen HIV-1 infection
Patient MHC/HLA A*23:01, B*15:03, B*35:01, Cw2, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52628

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HXB2 Location gp160(606-614)
gp41(95-103)
DNA(8040..8066)
gp160 Epitope Map
Author Location gp41(606-614)
Epitope TAVPWNASW Epitope Alignment
TAVPWNASW epitope logo
Subtype B
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A3, A33, B14, B35, C*04:01, C*08:02
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52614

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HXB2 Location gp160(760-767)
gp41(249-256)
DNA(8502..8525)
gp160 Epitope Map
Author Location gp41(760-767)
Epitope LRSLFLFS Epitope Alignment
LRSLFLFS epitope logo
Species (MHC/HLA) human(A*23:01)
Immunogen HIV-1 infection
Patient MHC/HLA A*23:01, B*15:03, B*35:01, Cw2, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52632

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HXB2 Location gp160(770-780)
gp41(259-269)
DNA(8532..8564)
gp160 Epitope Map
Author Location gp41(770-780)
Epitope RLRDLLLIVTR Epitope Alignment
RLRDLLLIVTR epitope logo
Species (MHC/HLA) human(A31)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A31, B44, B60, C*16, Cw3
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52637

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HXB2 Location gp160(787-795)
gp41(276-284)
DNA(8583..8609)
gp160 Epitope Map
Author Location gp41(787-795)
Epitope RRGWEVLKY Epitope Alignment
RRGWEVLKY epitope logo
Species (MHC/HLA) human(A1)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A1, B14, B8, Cw7, Cw8
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52625

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HXB2 Location gp160(843-851)
gp41(332-340)
DNA(8751..8777)
gp160 Epitope Map
Author Location gp41(843-851)
Epitope IPRRIRQGL Epitope Alignment
IPRRIRQGL epitope logo
Subtype B
Species (MHC/HLA) human(B7)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A3, B14, B7, C*07:02, C*08:02
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52638

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HXB2 Location gp160(849-856)
gp41(338-345)
DNA(8769..8792)
gp160 Epitope Map
Author Location gp41(849-856)
Epitope QGLERALL Epitope Alignment
QGLERALL epitope logo
Subtype B
Species (MHC/HLA) human(B8)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A1, B14, B8, Cw7, Cw8
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52634

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HXB2 Location Nef(19-27)
DNA(8851..8877)
Nef Epitope Map
Author Location Nef(19-27)
Epitope RMRRAEPAA Epitope Alignment
RMRRAEPAA epitope logo
Subtype B
Species (MHC/HLA) human(B62)
Immunogen HIV-1 infection
Patient MHC/HLA 1261: A*02:01, A29, B58, B62, C*03:04, C*16:01
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52624

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HXB2 Location Nef(73-82)
DNA(9013..9042)
Nef Epitope Map
Author Location Nef(73-82)
Epitope QVPLRPMTYK Epitope Alignment
QVPLRPMTYK epitope logo
Subtype B
Species (MHC/HLA) human(A3)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A3, B14, B7, C*07:02, C*08:02
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52644

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HXB2 Location Nef(74-81)
DNA(9016..9039)
Nef Epitope Map
Author Location Nef(74-81)
Epitope VPLRPMTY Epitope Alignment
VPLRPMTY epitope logo
Subtype B
Species (MHC/HLA) human(B35)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A3, B35, B8
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early treatment

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52630

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HXB2 Location Nef(77-85)
DNA(9025..9051)
Nef Epitope Map
Author Location Nef(79-85)
Epitope RPMTYKAAV Epitope Alignment
RPMTYKAAV epitope logo
Subtype B
Species (MHC/HLA) human
Immunogen HIV-1 infection
Patient MHC/HLA A3, A33, B14, B35, C*04:01, C*08:02
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early treatment

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52620

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HXB2 Location Nef(83-91)
DNA(9043..9069)
Nef Epitope Map
Author Location Nef(83-91)
Epitope AAVDLSHFL Epitope Alignment
AAVDLSHFL epitope logo
Species (MHC/HLA) human(B60, B62, C*08:02, Cw8)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A23, B44, B62, Cw3, Cw4; A1, A3, B14, B7, C*07:02, C*08:02; A*02:01, A31, B44, B60, C*16, Cw3; A1, A1, B14, B8, Cw7, Cw8
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early treatment

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52651

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HXB2 Location Nef(83-92)
DNA(9043..9072)
Nef Epitope Map
Author Location Nef(83-92)
Epitope AAVDLSHFLK Epitope Alignment
AAVDLSHFLK epitope logo
Subtype B
Species (MHC/HLA) human(A11)
Immunogen HIV-1 infection
Patient MHC/HLA A*02:01, A11, B51, B61, C*14, Cw2
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords acute/early infection, early treatment

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52646

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HXB2 Location Nef(90-97)
DNA(9064..9087)
Nef Epitope Map
Author Location Nef(90-97)
Epitope FLKEKGGL Epitope Alignment
FLKEKGGL epitope logo
Subtype B
Species (MHC/HLA) human(B8)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A3, B62, B8, Cw3, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52635

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HXB2 Location Nef(108-115)
DNA(9118..9141)
Nef Epitope Map
Author Location Nef(108-115)
Epitope DILDLWIY Epitope Alignment
DILDLWIY epitope logo
Species (MHC/HLA) human(Cw7)
Immunogen HIV-1 infection
Patient MHC/HLA A1, A1, B14, B8, Cw7, Cw8
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52629

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HXB2 Location Nef(134-141)
DNA(9196..9219)
Nef Epitope Map
Author Location Nef(134-141)
Epitope RYPLTFGW Epitope Alignment
RYPLTFGW epitope logo
Subtype B
Species (MHC/HLA) human(A33)
Immunogen HIV-1 infection
Patient MHC/HLA A3, A33, B14, B35, C*04:01, C*08:02
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


Displaying record number 52618

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HXB2 Location Nef(183-191)
DNA(9343..9369)
Nef Epitope Map
Author Location Nef(183-191)
Epitope WRFDSRLAF Epitope Alignment
WRFDSRLAF epitope logo
Subtype B
Species (MHC/HLA) human(B*15:03)
Immunogen HIV-1 infection
Patient MHC/HLA A*23:01, B*15:03, B*35:01, Cw2, Cw7
Experimental methods CD8 T-cell Elispot - IFNγ
Keywords binding affinity, acute/early infection, early-expressed proteins

Notes

References

Cao2003 Jianhong Cao, John McNevin, Sarah Holte, Lisa Fink, Lawrence Corey, and M. Juliana McElrath. Comprehensive Analysis of Human Immunodeficiency Virus Type 1 (HIV-1)-Specific Gamma Interferon-Secreting CD8+ T Cells in Primary HIV-1 Infection. J. Virol., 77(12):6867-6878, Jun 2003. PubMed ID: 12768006. Show all entries for this paper.


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