HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 56 matching records:

Displaying record number 61798

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HXB2 Location Gag(426-436)
p2p7p1p6(63-73)
DNA(2065..2097)
Gag Epitope Map
Author Location  
Epitope CTERQANFLGK Epitope Alignment
CTERQANFLGK epitope logo
Epitope Name CK11
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61733

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HXB2 Location Gag(426-440)
p2p7p1p6(63-77)
DNA(2065..2109)
Gag Epitope Map
Author Location p2p7p1p6(63-77)
Epitope CTERQANFLGKIWPS Epitope Alignment
CTERQANFLGKIWPS epitope logo
Epitope Name HC031
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61796

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HXB2 Location Gag(427-434)
p2p7p1p6(64-71)
DNA(2068..2091)
Gag Epitope Map
Author Location  
Epitope TERQANFL Epitope Alignment
TERQANFL epitope logo
Epitope Name TL8
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61797

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HXB2 Location Gag(427-436)
p2p7p1p6(64-73)
DNA(2068..2097)
Gag Epitope Map
Author Location  
Epitope TERQANFLGK Epitope Alignment
TERQANFLGK epitope logo
Epitope Name TK10
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61799

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HXB2 Location Pol(153-168)
Protease(97)-RT(13)
DNA(2541..2588)
Pol Epitope Map
Author Location Pol(153-168)
Epitope KNFPISPIETVPVKLK Epitope Alignment
KNFPISPIETVPVKLK epitope logo
Epitope Name HC049
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID406: A*03:01, A*31:01, B*40:01, B*44:03, C*03:04, C*04:01, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61800

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HXB2 Location Pol(158-172)
RT(3-17)
DNA(2556..2600)
Pol Epitope Map
Author Location RT(3-17)
Epitope SPIETVPVKLKPGMD Epitope Alignment
SPIETVPVKLKPGMD epitope logo
Epitope Name HC050
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID406: A*03:01, A*31:01, B*40:01, B*44:03, C*03:04, C*04:01, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61801

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HXB2 Location Pol(160-167)
RT(5-12)
DNA(2562..2585)
Pol Epitope Map
Author Location  
Epitope IETVPVKL Epitope Alignment
IETVPVKL epitope logo
Epitope Name IL8
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID406: A*03:01, A*31:01, B*40:01, B*44:03, C*03:04, C*04:01, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61802

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HXB2 Location Pol(270-284)
RT(115-129)
DNA(2892..2936)
Pol Epitope Map
Author Location RT(115-129)
Epitope YFSVPLDEGFRKYTA Epitope Alignment
YFSVPLDEGFRKYTA epitope logo
Epitope Name HC078
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61804

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HXB2 Location Pol(272-281)
RT(117-126)
DNA(2898..2927)
Pol Epitope Map
Author Location  
Epitope SVPLDEGFRK Epitope Alignment
SVPLDEGFRK epitope logo
Epitope Name SK10
Species (MHC/HLA) human(A*11:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61805

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HXB2 Location Pol(273-281)
RT(118-126)
DNA(2901..2927)
Pol Epitope Map
Author Location  
Epitope VPLDEGFRK Epitope Alignment
VPLDEGFRK epitope logo
Epitope Name VK9
Species (MHC/HLA) human(C*12:03)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61807

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HXB2 Location Pol(273-282)
RT(118-127)
DNA(2901..2930)
Pol Epitope Map
Author Location  
Epitope VPLDEGFRKY Epitope Alignment
VPLDEGFRKY epitope logo
Epitope Name VY10
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID417: A*03:01, A*30:04, B*35:01, B*50:01, C*04:01, C*06:02, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61806

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HXB2 Location Pol(274-282)
RT(119-127)
DNA(2904..2930)
Pol Epitope Map
Author Location  
Epitope PLDEGFRKY Epitope Alignment
PLDEGFRKY epitope logo
Epitope Name PY9
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID417: A*03:01, A*30:04, B*35:01, B*50:01, C*04:01, C*06:02, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61803

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HXB2 Location Pol(274-288)
RT(119-133)
DNA(2904..2948)
Pol Epitope Map
Author Location RT(119-133)
Epitope PLDEGFRKYTAFTIP Epitope Alignment
PLDEGFRKYTAFTIP epitope logo
Epitope Name HC079
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID417: A*03:01, A*30:04, B*35:01, B*50:01, C*04:01, C*06:02, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61808

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HXB2 Location Pol(278-292)
RT(123-137)
DNA(2916..2960)
Pol Epitope Map
Author Location RT(123-137)
Epitope GFRKYTAFTIPSINN Epitope Alignment
GFRKYTAFTIPSINN epitope logo
Epitope Name HC080
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61811

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HXB2 Location Pol(281-290)
RT(126-135)
DNA(2925..2954)
Pol Epitope Map
Author Location  
Epitope KYTAFTIPSI Epitope Alignment
KYTAFTIPSI epitope logo
Epitope Name KI10
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61810

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HXB2 Location Pol(282-290)
RT(127-135)
DNA(2928..2954)
Pol Epitope Map
Author Location  
Epitope YTAFTIPSI Epitope Alignment
YTAFTIPSI epitope logo
Epitope Name YI9
Species (MHC/HLA) human(A*02)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID415: A*02:01, A*03:01, B*07:02, B*44:02, C*07:02, DQB1*03:01, DQB1*06:02, DRB1*11:04, DRB1*15:01, DRB3, DRB5; VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61812

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HXB2 Location Pol(282-296)
RT(127-141)
DNA(2928..2972)
Pol Epitope Map
Author Location RT(127-141)
Epitope YTAFTIPSINNETPG Epitope Alignment
YTAFTIPSINNETPG epitope logo
Epitope Name HC081
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID415: A*02:01, A*03:01, B*07:02, B*44:02, C*07:02, DQB1*03:01, DQB1*06:02, DRB1*11:04, DRB1*15:01, DRB3, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61809

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HXB2 Location Pol(283-290)
RT(128-135)
DNA(2931..2954)
Pol Epitope Map
Author Location  
Epitope TAFTIPSI Epitope Alignment
TAFTIPSI epitope logo
Epitope Name TI8
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61813

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HXB2 Location Pol(288-296)
RT(133-141)
DNA(2946..2972)
Pol Epitope Map
Author Location  
Epitope PSINNETPG Epitope Alignment
PSINNETPG epitope logo
Epitope Name PG9
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID415: A*02:01, A*03:01, B*07:02, B*44:02, C*07:02, DQB1*03:01, DQB1*06:02, DRB1*11:04, DRB1*15:01, DRB3, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61814

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HXB2 Location Pol(310-324)
RT(155-169)
DNA(3012..3056)
Pol Epitope Map
Author Location RT(155-169)
Epitope GSPAIFQSSMTKILE Epitope Alignment
GSPAIFQSSMTKILE epitope logo
Epitope Name HC088
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID409: A*01:01, A*03:01, B*07:02, B*08:01, C*07:01, C*07:02, DQB1*02, DQB1*06:02, DRB1*03:01, DRB1*15:01, DRB3, DRB5; VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61816

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HXB2 Location Pol(311-321)
RT(156-166)
DNA(3015..3047)
Pol Epitope Map
Author Location  
Epitope SPAIFQSSMTK Epitope Alignment
SPAIFQSSMTK epitope logo
Epitope Name SK11
Species (MHC/HLA) human(A*11:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61815

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HXB2 Location Pol(311-321)
RT(156-166)
DNA(3015..3047)
Pol Epitope Map
Author Location  
Epitope SPAIFQSSMTK Epitope Alignment
SPAIFQSSMTK epitope logo
Epitope Name SK11
Species (MHC/HLA) human(B*07:02)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID409: A*01:01, A*03:01, B*07:02, B*08:01, C*07:01, C*07:02, DQB1*02, DQB1*06:02, DRB1*03:01, DRB1*15:01, DRB3, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61818

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HXB2 Location Pol(313-321)
RT(158-166)
DNA(3021..3047)
Pol Epitope Map
Author Location  
Epitope AIFQSSMTK Epitope Alignment
AIFQSSMTK epitope logo
Epitope Name AK9
Species (MHC/HLA) human(A*11:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61817

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HXB2 Location Pol(314-323)
RT(159-168)
DNA(3024..3053)
Pol Epitope Map
Author Location  
Epitope IFQSSMTKIL Epitope Alignment
IFQSSMTKIL epitope logo
Epitope Name IL10
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID409: A*01:01, A*03:01, B*07:02, B*08:01, C*07:01, C*07:02, DQB1*02, DQB1*06:02, DRB1*03:01, DRB1*15:01, DRB3, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61819

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HXB2 Location Pol(322-336)
RT(167-181)
DNA(3048..3092)
Pol Epitope Map
Author Location RT(167-181)
Epitope ILEPFRAQNPEIVIY Epitope Alignment
ILEPFRAQNPEIVIY epitope logo
Epitope Name HC091
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61820

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HXB2 Location Pol(326-336)
RT(171-181)
DNA(3060..3092)
Pol Epitope Map
Author Location  
Epitope FRAQNPEIVIY Epitope Alignment
FRAQNPEIVIY epitope logo
Epitope Name FY11
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61823

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HXB2 Location Pol(326-342)
RT(171-187)
DNA(3060..3110)
Pol Epitope Map
Author Location Pol(167-181)
Epitope FRAQNPEIVIYQYMDKK Epitope Alignment
FRAQNPEIVIYQYMDKK epitope logo
Epitope Name HC092
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61821

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HXB2 Location Pol(327-336)
RT(172-181)
DNA(3063..3092)
Pol Epitope Map
Author Location  
Epitope RAQNPEIVIY Epitope Alignment
RAQNPEIVIY epitope logo
Epitope Name RY10
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61822

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HXB2 Location Pol(328-336)
RT(173-181)
DNA(3066..3092)
Pol Epitope Map
Author Location  
Epitope AQNPEIVIY Epitope Alignment
AQNPEIVIY epitope logo
Epitope Name AY9
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61824

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HXB2 Location Pol(329-344)
RT(174-189)
DNA(3069..3116)
Pol Epitope Map
Author Location Pol(174-189)
Epitope KNPEIVIYQYMDDLYV Epitope Alignment
KNPEIVIYQYMDDLYV epitope logo
Epitope Name HC093
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID415: A*02:01, A*03:01, B*07:02, B*44:02, C*07:02, DQB1*03:01, DQB1*06:02, DRB1*11:04, DRB1*15:01, DRB3, DRB5; VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01; VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5; VID416: A*02:01, B*08:01, B*44:02, C*05:01, C*07:01; VID418: A*02:01, A*24:02, B*07:02, B*27:05, C*01:02, C*07:02, DQB1*03:01, DQB1*03:03, DRB1*04:01, DRB1*07:01, DRB4
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61825

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HXB2 Location Pol(331-339)
RT(176-184)
DNA(3075..3101)
Pol Epitope Map
Author Location  
Epitope PEIVIYQYM Epitope Alignment
PEIVIYQYM epitope logo
Epitope Name PM9
Species (MHC/HLA) human(B*18:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61826

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HXB2 Location Pol(332-340)
RT(177-185)
DNA(3078..3104)
Pol Epitope Map
Author Location  
Epitope EIVIYQYMD Epitope Alignment
EIVIYQYMD epitope logo
Epitope Name ED9
Species (MHC/HLA) human(B*18:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61827

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HXB2 Location Pol(334-344)
RT(179-189)
DNA(3084..3116)
Pol Epitope Map
Author Location  
Epitope VIYQYMDDLYV Epitope Alignment
VIYQYMDDLYV epitope logo
Epitope Name VV11
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID416: A*02:01, B*08:01, B*44:02, C*05:01, C*07:01
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61828

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HXB2 Location Pol(336-344)
RT(181-189)
DNA(3090..3116)
Pol Epitope Map
Author Location  
Epitope YQYMDDLYV Epitope Alignment
YQYMDDLYV epitope logo
Epitope Name YV9
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID416: A*02:01, B*08:01, B*44:02, C*05:01, C*07:01
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, optimal epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61830

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HXB2 Location Pol(337-344)
RT(182-189)
DNA(3093..3116)
Pol Epitope Map
Author Location  
Epitope QYMDDLYV Epitope Alignment
QYMDDLYV epitope logo
Epitope Name QV8
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection, vaccine
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61836

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HXB2 Location Pol(705-714)
RT(550-559)
DNA(4197..4226)
Pol Epitope Map
Author Location  
Epitope KLVSQGIRKV Epitope Alignment
KLVSQGIRKV epitope logo
Epitope Name KV10
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61837

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HXB2 Location Pol(705-716)
RT(550)-Integrase(1)
DNA(4197..4232)
Pol Epitope Map
Author Location  
Epitope KLVSQGIRKVLF Epitope Alignment
KLVSQGIRKVLF epitope logo
Epitope Name KF12
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61835

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HXB2 Location Pol(705-719)
RT(550)-Integrase(4)
DNA(4197..4241)
Pol Epitope Map
Author Location Pol(705-719)
Epitope KLVSQGIRKVLFLDG Epitope Alignment
KLVSQGIRKVLFLDG epitope logo
Epitope Name HC135
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61838

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HXB2 Location Pol(744-758)
Integrase(29-43)
DNA(4314..4358)
Pol Epitope Map
Author Location Pol(744-758)
Epitope DKAQAKEIVASCDKC Epitope Alignment
DKAQAKEIVASCDKC epitope logo
Epitope Name HC139
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61839

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HXB2 Location Pol(748-756)
Integrase(33-41)
DNA(4326..4352)
Pol Epitope Map
Author Location  
Epitope AKEIVASCD Epitope Alignment
AKEIVASCD epitope logo
Epitope Name AD9
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61840

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HXB2 Location Pol(748-758)
Integrase(33-43)
DNA(4326..4358)
Pol Epitope Map
Author Location  
Epitope AKEIVASCDKC Epitope Alignment
AKEIVASCDKC epitope logo
Epitope Name AC11
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61841

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HXB2 Location Pol(767-782)
Integrase(52-67)
DNA(4383..4430)
Pol Epitope Map
Author Location Pol(767-782)
Epitope GQVDCSPGIWQLDCTH Epitope Alignment
GQVDCSPGIWQLDCTH epitope logo
Epitope Name HC145
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61842

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HXB2 Location Pol(774-782)
Integrase(59-67)
DNA(4404..4430)
Pol Epitope Map
Author Location  
Epitope GIWQLDCTH Epitope Alignment
GIWQLDCTH epitope logo
Epitope Name GH9
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61850

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HXB2 Location Pol(891-905)
Integrase(176-190)
DNA(4755..4799)
Pol Epitope Map
Author Location Integrase(176-191)
Epitope VQMAVFIHNFKRKGG Epitope Alignment
VQMAVFIHNFKRKGG epitope logo
Epitope Name HC164
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01; VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61844

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HXB2 Location Pol(897-905)
Integrase(182-190)
DNA(4773..4799)
Pol Epitope Map
Author Location  
Epitope IHNFKRKGG Epitope Alignment
IHNFKRKGG epitope logo
Epitope Name IG9
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01; VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61848

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HXB2 Location Pol(974-981)
Integrase(259-266)
DNA(5004..5027)
Pol Epitope Map
Author Location  
Epitope VVPRRKAK Epitope Alignment
VVPRRKAK epitope logo
Epitope Name VK8
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection, vaccine
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61845

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HXB2 Location Pol(974-983)
Integrase(259-268)
DNA(5004..5033)
Pol Epitope Map
Author Location  
Epitope VVPRRKAKII Epitope Alignment
VVPRRKAKII epitope logo
Epitope Name VI10
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID413: A*01:01, A*03:01, B*08:01, B*44:02, C*05:01, C*07:01, DQB1*02, DQB1*03:01, DRB1*03:01, DRB1*11:01, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61843

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HXB2 Location Pol(974-988)
Integrase(259-273)
DNA(5004..5048)
Pol Epitope Map
Author Location Integrase(259-273)
Epitope VVPRRKAKIIRDYGK Epitope Alignment
VVPRRKAKIIRDYGK epitope logo
Epitope Name HC176
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID413: A*01:01, A*03:01, B*08:01, B*44:02, C*05:01, C*07:01, DQB1*02, DQB1*03:01, DRB1*03:01, DRB1*11:01, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61849

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HXB2 Location Pol(975-982)
Integrase(260-267)
DNA(5007..5030)
Pol Epitope Map
Author Location  
Epitope VPRRKAKI Epitope Alignment
VPRRKAKI epitope logo
Epitope Name VI8
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection, vaccine
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61846

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HXB2 Location Pol(978-988)
Integrase(263-273)
DNA(5016..5048)
Pol Epitope Map
Author Location  
Epitope RKAKIIRDYGK Epitope Alignment
RKAKIIRDYGK epitope logo
Epitope Name RK11
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID413: A*01:01, A*03:01, B*08:01, B*44:02, C*05:01, C*07:01, DQB1*02, DQB1*03:01, DRB1*03:01, DRB1*11:01, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61847

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HXB2 Location Pol(981-988)
Integrase(266-273)
DNA(5025..5048)
Pol Epitope Map
Author Location  
Epitope KIIRDYGK Epitope Alignment
KIIRDYGK epitope logo
Epitope Name KK8
Species (MHC/HLA) human(B*08:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID413: A*01:01, A*03:01, B*08:01, B*44:02, C*05:01, C*07:01, DQB1*02, DQB1*03:01, DRB1*03:01, DRB1*11:01, DRB3
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61829

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HXB2 Location Vif(11-26)
DNA(5071..5118)
Vif Epitope Map
Author Location Vif(11-26)
Epitope KQVDRMRIRTWKSLVK Epitope Alignment
KQVDRMRIRTWKSLVK epitope logo
Epitope Name HC102
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID403: A*01:01, A*30:01, B*13:02, B*39:01, C*06:02, C*07:01, DQB1*02, DQB1*05, DRB1*07:01, DRB1*16:01, DRB4, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61833

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HXB2 Location Vif(16-30)
DNA(5086..5130)
Vif Epitope Map
Author Location Vif(16-30)
Epitope MRIRTWKSLVKHHLT Epitope Alignment
MRIRTWKSLVKHHLT epitope logo
Epitope Name HC103
Species (MHC/HLA) human
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID418: A*02:01, A*24:02, B*07:02, B*27:05, C*01:02, C*07:02, DQB1*03:01, DQB1*03:03, DRB1*04:01, DRB1*07:01, DRB4
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61831

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HXB2 Location Vif(17-26)
DNA(5089..5118)
Vif Epitope Map
Author Location  
Epitope RIRTWKSLVK Epitope Alignment
RIRTWKSLVK epitope logo
Epitope Name RK10
Species (MHC/HLA) human(A*30:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID403: A*01:01, A*30:01, B*13:02, B*39:01, C*06:02, C*07:01, DQB1*02, DQB1*05, DRB1*07:01, DRB1*16:01, DRB4, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61832

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HXB2 Location Vif(18-26)
DNA(5092..5118)
Vif Epitope Map
Author Location  
Epitope IRTWKSLVK Epitope Alignment
IRTWKSLVK epitope logo
Epitope Name IK9
Species (MHC/HLA) human(A*30:01)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID403: A*01:01, A*30:01, B*13:02, B*39:01, C*06:02, C*07:01, DQB1*02, DQB1*05, DRB1*07:01, DRB1*16:01, DRB4, DRB5
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


Displaying record number 61834

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HXB2 Location Vif(18-27)
DNA(5092..5121)
Vif Epitope Map
Author Location  
Epitope IRTWKSLVKH Epitope Alignment
IRTWKSLVKH epitope logo
Epitope Name IH10
Species (MHC/HLA) human(B*27:05)
Immunogen HIV-1 infection, vaccine
Patient MHC/HLA VID418: A*02:01, A*24:02, B*07:02, B*27:05, C*01:02, C*07:02, DQB1*03:01, DQB1*03:03, DRB1*04:01, DRB1*07:01, DRB4
Country United Kingdom
Experimental methods Intracellular cytokine staining, Other
Keywords vaccine-induced immune responses, novel epitope

Notes

References

Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.


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