HIV molecular immunology database
Found 56 matching records:
Download this epitope record as JSON.
HXB2 Location | Gag(426-436) p2p7p1p6(63-73) DNA(2065..2097) |
Gag Epitope Map |
---|---|---|
Author Location | ||
Epitope |
CTERQANFLGK
|
Epitope Alignment
|
Epitope Name | CK11 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(426-440) p2p7p1p6(63-77) DNA(2065..2109) |
Gag Epitope Map |
---|---|---|
Author Location | p2p7p1p6(63-77) | |
Epitope |
CTERQANFLGKIWPS
|
Epitope Alignment
|
Epitope Name | HC031 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(427-434) p2p7p1p6(64-71) DNA(2068..2091) |
Gag Epitope Map |
---|---|---|
Author Location | ||
Epitope |
TERQANFL
|
Epitope Alignment
|
Epitope Name | TL8 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Gag(427-436) p2p7p1p6(64-73) DNA(2068..2097) |
Gag Epitope Map |
---|---|---|
Author Location | ||
Epitope |
TERQANFLGK
|
Epitope Alignment
|
Epitope Name | TK10 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
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HXB2 Location | Pol(153-168) Protease(97)-RT(13) DNA(2541..2588) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(153-168) | |
Epitope |
KNFPISPIETVPVKLK
|
Epitope Alignment
|
Epitope Name | HC049 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID406: A*03:01, A*31:01, B*40:01, B*44:03, C*03:04, C*04:01, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(158-172) RT(3-17) DNA(2556..2600) |
Pol Epitope Map |
---|---|---|
Author Location | RT(3-17) | |
Epitope |
SPIETVPVKLKPGMD
|
Epitope Alignment
|
Epitope Name | HC050 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID406: A*03:01, A*31:01, B*40:01, B*44:03, C*03:04, C*04:01, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(160-167) RT(5-12) DNA(2562..2585) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
IETVPVKL
|
Epitope Alignment
|
Epitope Name | IL8 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID406: A*03:01, A*31:01, B*40:01, B*44:03, C*03:04, C*04:01, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(270-284) RT(115-129) DNA(2892..2936) |
Pol Epitope Map |
---|---|---|
Author Location | RT(115-129) | |
Epitope |
YFSVPLDEGFRKYTA
|
Epitope Alignment
|
Epitope Name | HC078 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(272-281) RT(117-126) DNA(2898..2927) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
SVPLDEGFRK
|
Epitope Alignment
|
Epitope Name | SK10 | |
Species (MHC/HLA) | human(A*11:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(273-281) RT(118-126) DNA(2901..2927) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
VPLDEGFRK
|
Epitope Alignment
|
Epitope Name | VK9 | |
Species (MHC/HLA) | human(C*12:03) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(273-282) RT(118-127) DNA(2901..2930) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
VPLDEGFRKY
|
Epitope Alignment
|
Epitope Name | VY10 | |
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID417: A*03:01, A*30:04, B*35:01, B*50:01, C*04:01, C*06:02, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(274-282) RT(119-127) DNA(2904..2930) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
PLDEGFRKY
|
Epitope Alignment
|
Epitope Name | PY9 | |
Species (MHC/HLA) | human(B*35:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID417: A*03:01, A*30:04, B*35:01, B*50:01, C*04:01, C*06:02, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
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HXB2 Location | Pol(274-288) RT(119-133) DNA(2904..2948) |
Pol Epitope Map |
---|---|---|
Author Location | RT(119-133) | |
Epitope |
PLDEGFRKYTAFTIP
|
Epitope Alignment
|
Epitope Name | HC079 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID417: A*03:01, A*30:04, B*35:01, B*50:01, C*04:01, C*06:02, DQB1*02, DQB1*05, DRB1*01:01, DRB1*07:01, DRB4 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(278-292) RT(123-137) DNA(2916..2960) |
Pol Epitope Map |
---|---|---|
Author Location | RT(123-137) | |
Epitope |
GFRKYTAFTIPSINN
|
Epitope Alignment
|
Epitope Name | HC080 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(281-290) RT(126-135) DNA(2925..2954) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
KYTAFTIPSI
|
Epitope Alignment
|
Epitope Name | KI10 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(282-290) RT(127-135) DNA(2928..2954) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
YTAFTIPSI
|
Epitope Alignment
|
Epitope Name | YI9 | |
Species (MHC/HLA) | human(A*02) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID415: A*02:01, A*03:01, B*07:02, B*44:02, C*07:02, DQB1*03:01, DQB1*06:02, DRB1*11:04, DRB1*15:01, DRB3, DRB5; VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(282-296) RT(127-141) DNA(2928..2972) |
Pol Epitope Map |
---|---|---|
Author Location | RT(127-141) | |
Epitope |
YTAFTIPSINNETPG
|
Epitope Alignment
|
Epitope Name | HC081 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID415: A*02:01, A*03:01, B*07:02, B*44:02, C*07:02, DQB1*03:01, DQB1*06:02, DRB1*11:04, DRB1*15:01, DRB3, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(283-290) RT(128-135) DNA(2931..2954) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
TAFTIPSI
|
Epitope Alignment
|
Epitope Name | TI8 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(288-296) RT(133-141) DNA(2946..2972) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
PSINNETPG
|
Epitope Alignment
|
Epitope Name | PG9 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID415: A*02:01, A*03:01, B*07:02, B*44:02, C*07:02, DQB1*03:01, DQB1*06:02, DRB1*11:04, DRB1*15:01, DRB3, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(310-324) RT(155-169) DNA(3012..3056) |
Pol Epitope Map |
---|---|---|
Author Location | RT(155-169) | |
Epitope |
GSPAIFQSSMTKILE
|
Epitope Alignment
|
Epitope Name | HC088 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID409: A*01:01, A*03:01, B*07:02, B*08:01, C*07:01, C*07:02, DQB1*02, DQB1*06:02, DRB1*03:01, DRB1*15:01, DRB3, DRB5; VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(311-321) RT(156-166) DNA(3015..3047) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
SPAIFQSSMTK
|
Epitope Alignment
|
Epitope Name | SK11 | |
Species (MHC/HLA) | human(A*11:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(311-321) RT(156-166) DNA(3015..3047) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
SPAIFQSSMTK
|
Epitope Alignment
|
Epitope Name | SK11 | |
Species (MHC/HLA) | human(B*07:02) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID409: A*01:01, A*03:01, B*07:02, B*08:01, C*07:01, C*07:02, DQB1*02, DQB1*06:02, DRB1*03:01, DRB1*15:01, DRB3, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(313-321) RT(158-166) DNA(3021..3047) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
AIFQSSMTK
|
Epitope Alignment
|
Epitope Name | AK9 | |
Species (MHC/HLA) | human(A*11:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID421: A*02:01, A*11:01, B*35:03, B*40:02, C*02:02, C*12:03 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(314-323) RT(159-168) DNA(3024..3053) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
IFQSSMTKIL
|
Epitope Alignment
|
Epitope Name | IL10 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID409: A*01:01, A*03:01, B*07:02, B*08:01, C*07:01, C*07:02, DQB1*02, DQB1*06:02, DRB1*03:01, DRB1*15:01, DRB3, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(322-336) RT(167-181) DNA(3048..3092) |
Pol Epitope Map |
---|---|---|
Author Location | RT(167-181) | |
Epitope |
ILEPFRAQNPEIVIY
|
Epitope Alignment
|
Epitope Name | HC091 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(326-336) RT(171-181) DNA(3060..3092) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
FRAQNPEIVIY
|
Epitope Alignment
|
Epitope Name | FY11 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(326-342) RT(171-187) DNA(3060..3110) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(167-181) | |
Epitope |
FRAQNPEIVIYQYMDKK
|
Epitope Alignment
|
Epitope Name | HC092 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(327-336) RT(172-181) DNA(3063..3092) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
RAQNPEIVIY
|
Epitope Alignment
|
Epitope Name | RY10 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(328-336) RT(173-181) DNA(3066..3092) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
AQNPEIVIY
|
Epitope Alignment
|
Epitope Name | AY9 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(329-344) RT(174-189) DNA(3069..3116) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(174-189) | |
Epitope |
KNPEIVIYQYMDDLYV
|
Epitope Alignment
|
Epitope Name | HC093 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID415: A*02:01, A*03:01, B*07:02, B*44:02, C*07:02, DQB1*03:01, DQB1*06:02, DRB1*11:04, DRB1*15:01, DRB3, DRB5; VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01; VID411: A*02:01, B*08:01, B*51:01, C*03:03, C*07:01, DQB1*02, DQB1*03:03, DRB1*03:01, DRB1*09:01, DRB3, DRB5; VID416: A*02:01, B*08:01, B*44:02, C*05:01, C*07:01; VID418: A*02:01, A*24:02, B*07:02, B*27:05, C*01:02, C*07:02, DQB1*03:01, DQB1*03:03, DRB1*04:01, DRB1*07:01, DRB4 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(331-339) RT(176-184) DNA(3075..3101) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
PEIVIYQYM
|
Epitope Alignment
|
Epitope Name | PM9 | |
Species (MHC/HLA) | human(B*18:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(332-340) RT(177-185) DNA(3078..3104) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
EIVIYQYMD
|
Epitope Alignment
|
Epitope Name | ED9 | |
Species (MHC/HLA) | human(B*18:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(334-344) RT(179-189) DNA(3084..3116) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
VIYQYMDDLYV
|
Epitope Alignment
|
Epitope Name | VV11 | |
Species (MHC/HLA) | human(A*02:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID416: A*02:01, B*08:01, B*44:02, C*05:01, C*07:01 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(336-344) RT(181-189) DNA(3090..3116) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
YQYMDDLYV
|
Epitope Alignment
|
Epitope Name | YV9 | |
Species (MHC/HLA) | human(A*02:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID416: A*02:01, B*08:01, B*44:02, C*05:01, C*07:01 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, optimal epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(337-344) RT(182-189) DNA(3093..3116) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
QYMDDLYV
|
Epitope Alignment
|
Epitope Name | QV8 | |
Species (MHC/HLA) | human(A*02:01) | |
Immunogen | HIV-1 infection, vaccine | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(705-714) RT(550-559) DNA(4197..4226) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
KLVSQGIRKV
|
Epitope Alignment
|
Epitope Name | KV10 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(705-716) RT(550)-Integrase(1) DNA(4197..4232) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
KLVSQGIRKVLF
|
Epitope Alignment
|
Epitope Name | KF12 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(705-719) RT(550)-Integrase(4) DNA(4197..4241) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(705-719) | |
Epitope |
KLVSQGIRKVLFLDG
|
Epitope Alignment
|
Epitope Name | HC135 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(744-758) Integrase(29-43) DNA(4314..4358) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(744-758) | |
Epitope |
DKAQAKEIVASCDKC
|
Epitope Alignment
|
Epitope Name | HC139 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(748-756) Integrase(33-41) DNA(4326..4352) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
AKEIVASCD
|
Epitope Alignment
|
Epitope Name | AD9 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(748-758) Integrase(33-43) DNA(4326..4358) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
AKEIVASCDKC
|
Epitope Alignment
|
Epitope Name | AC11 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(767-782) Integrase(52-67) DNA(4383..4430) |
Pol Epitope Map |
---|---|---|
Author Location | Pol(767-782) | |
Epitope |
GQVDCSPGIWQLDCTH
|
Epitope Alignment
|
Epitope Name | HC145 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(774-782) Integrase(59-67) DNA(4404..4430) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
GIWQLDCTH
|
Epitope Alignment
|
Epitope Name | GH9 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(891-905) Integrase(176-190) DNA(4755..4799) |
Pol Epitope Map |
---|---|---|
Author Location | Integrase(176-191) | |
Epitope |
VQMAVFIHNFKRKGG
|
Epitope Alignment
|
Epitope Name | HC164 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01; VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(897-905) Integrase(182-190) DNA(4773..4799) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
IHNFKRKGG
|
Epitope Alignment
|
Epitope Name | IG9 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID410: A*30:02, B*18:01, B*57:03, C*07:01, C*18:01; VID404: A*68:01, B*44:02, B*51:01, C*07:04, C*14:02, DQB1*06:02, DQB1*06:05, DRB1*13:01, DRB1*13:02, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(974-981) Integrase(259-266) DNA(5004..5027) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
VVPRRKAK
|
Epitope Alignment
|
Epitope Name | VK8 | |
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | HIV-1 infection, vaccine | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(974-983) Integrase(259-268) DNA(5004..5033) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
VVPRRKAKII
|
Epitope Alignment
|
Epitope Name | VI10 | |
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID413: A*01:01, A*03:01, B*08:01, B*44:02, C*05:01, C*07:01, DQB1*02, DQB1*03:01, DRB1*03:01, DRB1*11:01, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(974-988) Integrase(259-273) DNA(5004..5048) |
Pol Epitope Map |
---|---|---|
Author Location | Integrase(259-273) | |
Epitope |
VVPRRKAKIIRDYGK
|
Epitope Alignment
|
Epitope Name | HC176 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID413: A*01:01, A*03:01, B*08:01, B*44:02, C*05:01, C*07:01, DQB1*02, DQB1*03:01, DRB1*03:01, DRB1*11:01, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(975-982) Integrase(260-267) DNA(5007..5030) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
VPRRKAKI
|
Epitope Alignment
|
Epitope Name | VI8 | |
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | HIV-1 infection, vaccine | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(978-988) Integrase(263-273) DNA(5016..5048) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
RKAKIIRDYGK
|
Epitope Alignment
|
Epitope Name | RK11 | |
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID413: A*01:01, A*03:01, B*08:01, B*44:02, C*05:01, C*07:01, DQB1*02, DQB1*03:01, DRB1*03:01, DRB1*11:01, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Pol(981-988) Integrase(266-273) DNA(5025..5048) |
Pol Epitope Map |
---|---|---|
Author Location | ||
Epitope |
KIIRDYGK
|
Epitope Alignment
|
Epitope Name | KK8 | |
Species (MHC/HLA) | human(B*08:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID413: A*01:01, A*03:01, B*08:01, B*44:02, C*05:01, C*07:01, DQB1*02, DQB1*03:01, DRB1*03:01, DRB1*11:01, DRB3 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(11-26) DNA(5071..5118) |
Vif Epitope Map |
---|---|---|
Author Location | Vif(11-26) | |
Epitope |
KQVDRMRIRTWKSLVK
|
Epitope Alignment
|
Epitope Name | HC102 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID403: A*01:01, A*30:01, B*13:02, B*39:01, C*06:02, C*07:01, DQB1*02, DQB1*05, DRB1*07:01, DRB1*16:01, DRB4, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(16-30) DNA(5086..5130) |
Vif Epitope Map |
---|---|---|
Author Location | Vif(16-30) | |
Epitope |
MRIRTWKSLVKHHLT
|
Epitope Alignment
|
Epitope Name | HC103 | |
Species (MHC/HLA) | human | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID418: A*02:01, A*24:02, B*07:02, B*27:05, C*01:02, C*07:02, DQB1*03:01, DQB1*03:03, DRB1*04:01, DRB1*07:01, DRB4 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(17-26) DNA(5089..5118) |
Vif Epitope Map |
---|---|---|
Author Location | ||
Epitope |
RIRTWKSLVK
|
Epitope Alignment
|
Epitope Name | RK10 | |
Species (MHC/HLA) | human(A*30:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID403: A*01:01, A*30:01, B*13:02, B*39:01, C*06:02, C*07:01, DQB1*02, DQB1*05, DRB1*07:01, DRB1*16:01, DRB4, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(18-26) DNA(5092..5118) |
Vif Epitope Map |
---|---|---|
Author Location | ||
Epitope |
IRTWKSLVK
|
Epitope Alignment
|
Epitope Name | IK9 | |
Species (MHC/HLA) | human(A*30:01) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID403: A*01:01, A*30:01, B*13:02, B*39:01, C*06:02, C*07:01, DQB1*02, DQB1*05, DRB1*07:01, DRB1*16:01, DRB4, DRB5 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.
Download this epitope record as JSON.
HXB2 Location | Vif(18-27) DNA(5092..5121) |
Vif Epitope Map |
---|---|---|
Author Location | ||
Epitope |
IRTWKSLVKH
|
Epitope Alignment
|
Epitope Name | IH10 | |
Species (MHC/HLA) | human(B*27:05) | |
Immunogen | HIV-1 infection, vaccine | |
Patient MHC/HLA | VID418: A*02:01, A*24:02, B*07:02, B*27:05, C*01:02, C*07:02, DQB1*03:01, DQB1*03:03, DRB1*04:01, DRB1*07:01, DRB4 | |
Country | United Kingdom | |
Experimental methods | Intracellular cytokine staining, Other | |
Keywords | vaccine-induced immune responses, novel epitope |
Borthwick2017 Nicola Borthwick, Zhansong Lin, Tomohiro Akahoshi, Anuska Llano, Sandra Silva-Arrieta, Tina Ahmed, Lucy Dorrell, Christian Brander, Hayato Murakoshi, Masafumi Takiguchi, and Tomáš Hanke. Novel, In-Natural-Infection Subdominant HIV-1 CD8+ T-Cell Epitopes Revealed in Human Recipients of Conserved-Region T-Cell Vaccines. PLoS One, 12(4):1-19, 2017. PubMed ID: 28448594. Show all entries for this paper.