HIV molecular immunology database

 

Search CTL/CD8+ T-Cell Epitope Database

Found 13 matching records:

Displaying record number 53602

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HXB2 Location Gag(20-28)
p17(20-28)
DNA(847..873)
Gag Epitope Map
Author Location Gag(20-28)
Epitope RLRPGGKKK Epitope Alignment
RLRPGGKKK epitope logo
Show epitope variants
Epitope Name RK9
Subtype B
Species (MHC/HLA) human(A*03:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, escape, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53603

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HXB2 Location Gag(77-85)
p17(77-85)
DNA(1018..1044)
Gag Epitope Map
Author Location Gag(77-85)
Epitope SLYNTIATL Epitope Alignment
SLYNTIATL epitope logo
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Epitope Name SL9
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, escape, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53604

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HXB2 Location Pol(262-270)
RT(107-115)
DNA(2868..2894)
Pol Epitope Map
Author Location Pol(262-270)
Epitope TVLDVGDAY Epitope Alignment
TVLDVGDAY epitope logo
Epitope Name TY9
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53606

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HXB2 Location Pol(273-282)
RT(118-127)
DNA(2901..2930)
Pol Epitope Map
Author Location Pol(273-282)
Epitope VPLDEDFRKY Epitope Alignment
VPLDEDFRKY epitope logo
Epitope Name VY10
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53605

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HXB2 Location Pol(283-290)
RT(128-135)
DNA(2931..2954)
Pol Epitope Map
Author Location Pol(283-290)
Epitope TAFTIPSI Epitope Alignment
TAFTIPSI epitope logo
Epitope Name TI8
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53607

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HXB2 Location Pol(330-338)
RT(175-183)
DNA(3072..3098)
Pol Epitope Map
Author Location Pol(330-338)
Epitope HPDIVIYQY Epitope Alignment
HPDIVIYQY epitope logo
Epitope Name HY9
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53608

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HXB2 Location Pol(464-472)
RT(309-317)
DNA(3474..3500)
Pol Epitope Map
Author Location Pol(464-472)
Epitope ILKEPVHGV Epitope Alignment
ILKEPVHGV epitope logo
Epitope Name IV9
Subtype B
Species (MHC/HLA) human(A*02:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53609

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HXB2 Location Pol(685-693)
RT(530-538)
DNA(4137..4163)
Pol Epitope Map
Author Location Pol(685-693)
Epitope KVYLAWVPA Epitope Alignment
KVYLAWVPA epitope logo
Epitope Name KA9
Subtype B
Species (MHC/HLA) human(A*03)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53596

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HXB2 Location Vif(57-66)
DNA(5209..5238)
Vif Epitope Map
Author Location Vif(57-66)
Epitope IPLGDAKLII Epitope Alignment
IPLGDAKLII epitope logo
Epitope Name II10
Subtype B
Species (MHC/HLA) human(B*51)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, escape, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53597

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HXB2 Location Vif(61-69)
DNA(5221..5247)
Vif Epitope Map
Author Location Vif(61-69)
Epitope DAKLIITTY Epitope Alignment
DAKLIITTY epitope logo
Show epitope variants
Epitope Name DY9
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, escape, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53599

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HXB2 Location Nef(74-81)
DNA(9016..9039)
Nef Epitope Map
Author Location Nef(74-81)
Epitope VPLRPMTY Epitope Alignment
VPLRPMTY epitope logo
Show epitope variants
Epitope Name VY8
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, escape, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53610

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HXB2 Location Nef(128-137)
DNA(9178..9207)
Nef Epitope Map
Author Location Nef(127-136)
Epitope TPGPGVRYPL Epitope Alignment
TPGPGVRYPL epitope logo
Show epitope variants
Epitope Name Nef-TL10
Subtype B
Species (MHC/HLA) human(B*35:01)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


Displaying record number 53600

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HXB2 Location Nef(135-143)
DNA(9199..9225)
Nef Epitope Map
Author Location Nef(135-143)
Epitope YPLTFGWCY Epitope Alignment
YPLTFGWCY epitope logo
Epitope Name YY9
Subtype B
Species (MHC/HLA) human(B*35)
Immunogen HIV-1 infection
Patient MHC/HLA 8183A: A*02:01, A*03:01, B*35:01, B*51, C*04, C*06
Country United States
Experimental methods CD8 T-cell Elispot - IFNγ, Chromium-release assay, Intracellular cytokine staining
Keywords dynamics, acute/early infection

Notes

References

Bansal2005a Anju Bansal, Ethan Gough, Steffanie Sabbaj, Doug Ritter, Karina Yusim, Greg Sfakianos, Grace Aldrovandi, Richard A. Kaslow, Craig M. Wilson, Mark J. Mulligan, J. Michael Kilby, and Paul A. Goepfert. CD8 T-Cell Responses in Early HIV-1 Infection Are Skewed Towards High Entropy Peptides. AIDS, 19(3):241-250, 18 Feb 2005. PubMed ID: 15718834. Show all entries for this paper.


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