HIV molecular immunology database
The HIV Molecular Immunology Database is an annotated, searchable collection of HIV-1 cytotoxic and helper T-cell epitopes and antibody binding sites.
IQ-tree is a fast and effective stochastic algorithm for finding ML trees. We have developed a convenient web server for building trees with this method. A nice feature of this method is the ability to output a table of site-specific rates of evolution for each position in the alignment. 18 September 2017