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LOCUS HIVU96576 615 bp DNA linear VRL 17-JAN-1998
DEFINITION HIV-1 patient MA population variant MAX30 from USA, envelope
glycoprotein, C2-V5 region (env) gene, partial cds
ACCESSION U96576
VERSION U96576.1 GI:2190880
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 615)
Show all sequences for reference 1
AUTHORS Delwart,E.L., Mullins,J.I., Gupta,P., Learn,G.H. Jr.., Holodniy,M.,
Katzenstein,D., Walker,B.D. and Singh,M.K.
TITLE Human immunodeficiency virus type 1 populations in blood and semen
JOURNAL J. Virol. 72 (1), 617-623 (1998)
PUBMED 9420266
REFERENCE 2 (bases 1 to 615)
Show all sequences for reference 2
AUTHORS Delwart,E.L., Singh,M., Gupta,P., Learn,G.H. Jr.., Holodniy,M.,
Katzenstein,D., Walker,B.D. and Mullins,J.I.
TITLE Direct Submission
JOURNAL Submitted (06-APR-1997) Aaron Diamond AIDS Research Center, 455
First Ave., New York, NY 10016, USA
COMMENT These sequences from patient MA (U96571-U96578) were taken at ~6
years post-infection and 9 months after start of AZT; based on data
for this patient in other papers, this puts the sampling date at
January 1990 [JM 12/08].
FEATURES Location/Qualifiers
source 1..615
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="patient MA"
/db_xref="taxon:11676"
/pop_variant="MAX30"
/note="nonspermatozoal mononuclear cell"
gene <1..>615
/gene="env"
CDS <1..>615
/gene="env"
/note="SU glycoprotein, gp120; C2-V5 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAC40422.1"
/db_xref="GI:2190881"
/translation="EEEVVIRSENFTENHKIIIVQLKEPVEINCTRPGNNTRKSIPMG
PGRAWFATGDIIGDIRKAHCNISRAKWNNTLEQVVKKLGEQFRNKTIIFNQHSGGDPE
IVMHSFNCGGEFFYCNTTQLFNSTWNNGTWNFTGTEGNSTIITLQCRIKQFINLWQKV
GKAMYAPPIQGNISCSSNITGLLLTRDGGNESKPNETFRPGGGDM"
BASE COUNT 250 a 95 c 130 g 140 t
ORIGIN
1 gaagaagagg tagtaattag atctgaaaat ttcacggaaa atcataaaat cataatagta
61 cagctgaaag aacctgtaga aattaattgc acaagacccg gcaacaatac aagaaaaagt
121 atacctatgg gaccagggag agcatggttt gcaacaggag acataatagg agatataaga
181 aaagcacatt gtaacattag tagagcaaaa tggaataaca ctttggaaca ggtagttaaa
241 aaattaggag aacaatttag gaataaaaca ataatcttta atcaacactc aggaggggac
301 ccagaaattg taatgcacag ctttaattgt ggaggggaat ttttctactg taatacaaca
361 caactgttta atagtacttg gaataatggt acttggaatt ttactggaac tgaaggaaat
421 agcacaataa tcacactcca atgcagaata aaacaattta taaacctgtg gcagaaagta
481 ggaaaagcaa tgtatgcccc tcccatccaa ggaaatatta gctgttcatc aaatattaca
541 gggctgctat taacaagaga tggtggtaac gagagcaagc ccaacgagac cttcagacct
601 ggaggaggag atatg
//
last modified: Tue May 31 10:56 2022