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LOCUS HIVU84838 1204 bp DNA linear VRL 23-FEB-1998
DEFINITION HIV-1 strain PC13 from USA, envelope glycoprotein (env) gene,
partial cds
ACCESSION U84838
VERSION U84838.1 GI:2290083
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1204)
Show all sequences for reference 1
AUTHORS Connor,R.I., Korber,B.T.M., Graham,B.S., Hahn,B.H., Ho,D.D.,
Walker,B.D., Neumann,A.U., Vermund,S.H., Mestecky,J., Jackson,S.,
Fenamore,E., Cao,Y., Gao,F., Kalams,S., Kunstman,K.J., McDonald,D.,
McWilliams,N., Trkola,A., Moore,J.P. and Wolinsky,S.M.
TITLE Immunological and virological analyses of persons infected by human
immunodeficiency virus type 1 while participating in trials of
recombinant gp120 subunit vaccines
JOURNAL J. Virol. 72 (2), 1552-1576 (1998)
PUBMED 9445059
REFERENCE 2 (bases 1 to 1204)
Show all sequences for reference 2
AUTHORS Wolinsky,S. and Hahn,B.
TITLE Direct Submission
JOURNAL Submitted (13-JAN-1997) HIV Database, Los Alamos Nat''l Labs, Mail
Stop K710, Los Alamos, NM 87545, USA
COMMENT Enrollment for study took place 1/94 to 6/95; sample date of 1995
is an estimate. C13 became seropositive 540 days after enrollment.
FEATURES Location/Qualifiers
source 1..1204
/organism="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/strain="PC13"
/db_xref="taxon:11676"
/note="subtype B; PBMC from the partner of a late
vaccine-break patient who had received HIVSF2 gp120 as a
vaccine, and a viral isolate taken from the same sample
had a non-syncytium-inducing phenotype"
gene <1..>1204
/gene="env"
CDS <1..>1204
/gene="env"
/note="gp120"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAC58877.1"
/db_xref="GI:2290084"
/translation="KPCVKLTPLCVTLKCTNYNITNGNNTTNSTMAPKMEKGEMKNCS
FNITTDMRDKVRKEYATFYDLDVAQIKDDNDNTSYRLISCNTSVFTQACPQISLEPIP
IHYCAPAGFAILKCRDKKFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVI
RSENFTNNAKTIIVQLKEPVQIDCTRPNNNTRRSIHIAPGRAFHATGNIIGNIRKAYC
TINGTKWNNTLKQIVEKLREQFKNKTIVFSQSSGGDPEIVMHSFNCGGEFFYCNTTQL
FNSTWNNTWPNITKGNITLPCKIKQIINLWQEVGKAMYAPPISGKIWCLSNITGLLLT
RDGGDDNSTNETEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRRVVQREKR
AVGIGAVFL"
BASE COUNT 475 a 197 c 243 g 289 t
ORIGIN
1 aaagccatgt gtaaaattaa ccccactctg tgttacttta aagtgcacta attataatat
61 tactaatggg aataacacca ctaatagtac aatggcgccc aagatggaga aaggagaaat
121 gaaaaactgc tctttcaata tcaccactga catgagagat aaggtgcgga aagaatatgc
181 aacgttttat gaccttgatg tagcacaaat aaaagatgat aatgataata ccagctatag
241 gttgataagt tgtaatacct cagtctttac acaggcctgt ccacagatat ctcttgagcc
301 aattcccata cattattgtg ccccggctgg ttttgcgatt ctaaagtgta gagataagaa
361 attcaatgga acaggaccat gtaaaaatgt cagcacagta caatgtacac atggaattag
421 gccagtagta tcaactcaac tgctgttaaa tggcagtcta gcagaagaag aggtagtaat
481 tagatctgaa aacttcacga acaatgctaa aaccataata gtacagctga aagaacctgt
541 acaaattgat tgtacaagac ccaacaacaa tacaagaaga agcatacata tagcaccagg
601 gagagcattt catgcaacag gaaacataat aggaaatata agaaaagcat attgtaccat
661 taatggaaca aaatggaata acactttaaa acagatagtt gaaaaattaa gagaacaatt
721 taagaataaa acaatagtct ttagtcaatc ctcaggaggg gacccagaaa ttgtaatgca
781 cagtttcaat tgtggaggag aatttttcta ctgtaataca acacaactgt ttaatagtac
841 ttggaataat acttggccaa atataactaa aggaaatatc acactcccat gtaaaataaa
901 acaaattata aacctgtggc aggaagtagg aaaagcaatg tatgcccctc ccatcagcgg
961 aaaaatttgg tgtttatcaa atattacagg gctgctatta acaagagatg gtggtgatga
1021 caatagcacc aacgaaaccg agatcttcag acctggagga ggagatatga gggacaattg
1081 gagaagtgaa ttatataaat ataaagtagt aaaaattgaa ccattaggag tagcacccac
1141 tagggcaaag aggagagttg tgcagagaga aaaaagagca gtgggaatag gagctgtgtt
1201 cctt
//
last modified: Tue May 31 10:56 2022