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LOCUS HIV1U56191 608 bp DNA linear VRL 21-MAY-1997
DEFINITION HIV-1 clone 13Pb1-5 from Seattle, envelope glycoprotein, V3-V5
region (env) gene, partial cds
ACCESSION U56191
VERSION U56191.1 GI:1323896
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 608)
Show all sequences for reference 1
AUTHORS Liu,S.L., Schacker,T., Musey,L., Shriner,D., McElrath,M.J.,
Corey,L. and Mullins,J.I.
TITLE Divergent patterns of progression to AIDS after infection from the
same source: human immunodeficiency virus type 1 evolution and
antiviral responses
JOURNAL J. Virol. 71 (6), 4284-4295 (1997)
PUBMED 9151816
REFERENCE 2 (bases 1 to 608)
Show all sequences for reference 2
AUTHORS Liu,S.-L.
TITLE Direct Submission
JOURNAL Submitted (23-APR-1996) Shan-Lu Liu, University of Washington,
Department of Microbiology, Box 357740, Seattle, WA 98195-7740, USA
REFERENCE 3
Show all sequences for reference 3
AUTHORS Kils-Hutten,L., Cheynier,R., Wain-Hobson,S. and Meyerhans,A.
TITLE Phylogenetic reconstruction of intrapatient evolution of human
immunodeficiency virus type 1: predominance of drift and purifying
selection.
JOURNAL J Gen Virol. 2001 Jul;82(Pt 7):1621-7.
PUBMED 11413373
FEATURES Location/Qualifiers
source 1..608
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="patient 13 visit 1"
/db_xref="taxon:11676"
/clone="13Pb1-5"
/note="sample PBMC provirus"
gene 1..608
/gene="env"
CDS <1..>608
/gene="env"
/note="gp120"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein, V3-V5 region"
/protein_id="AAC57261.1"
/db_xref="GI:1323897"
/translation="EEEIVIRSENLTDNAKTIIVQLKESVKINCTRPNNNTRKSINMG
PGRAFYTTGQIIGDIRQAHCNISRAQWNNTLGQIVEKLREKFNKTIVFNQSSGGDPEI
VTHSFNCGGEFFYCNSAQLFNSTWNSTKRSDNNEDPITLPCRIKQIINMWQEVGKAMY
APPISGEIRCSSSITGLLLTRDGGNSDDTENKTEIFSPGGGD"
BASE COUNT 257 a 94 c 118 g 139 t
ORIGIN
1 agaagaagag atagtaatta gatctgaaaa tctcacagac aatgctaaaa ccataatagt
61 acagctaaaa gaatctgtaa aaatcaattg tacaagaccc aacaacaata caagaaaaag
121 tataaatatg ggaccaggga gagcatttta tacaacagga caaataatag gagatataag
181 acaagcacat tgtaacatta gtagagcaca atggaataac actctaggac agatagttga
241 aaaattaaga gaaaaattta ataaaacaat agtctttaat caatcctcag gaggggaccc
301 agaaattgta acacacagtt ttaattgtgg aggagaattt ttctattgta attcagcaca
361 actatttaat agtacttgga atagtactaa aaggtcagat aacaatgaag accctatcac
421 actcccatgc agaataaaac aaattataaa catgtggcag gaagtaggaa aagcaatgta
481 tgcccctccc atcagtggag aaattagatg ttcatcaagt attacagggc tgctattaac
541 aagagatggt ggtaatagtg atgataccga gaacaagacc gagatcttca gccctggagg
601 aggagata
//
last modified: Tue May 31 10:56 2022