HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    HIV1U24786		     319 bp    DNA     linear	VRL 03-SEP-1996
DEFINITION  Human immunodeficiency virus type 1 envelope glycoprotein (env)
	    gene, V3 region, clone Cbu3.9, partial cds
ACCESSION   U24786
VERSION     U24786.1 GI:818366
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 319)
            Show all sequences for reference 1
  AUTHORS   Briant,L., Wade,C.M., Puel,J., Brown,A.J. and Guyader,M.
  TITLE     Analysis of envelope sequence variants suggests multiple mechanisms
	    of mother-to-child transmission of human immunodeficiency virus
	    type 1
  JOURNAL   J. Virol. 69 (6), 3778-3788 (1995)
  PUBMED    7745725
REFERENCE   2 (bases 1 to 319)
            Show all sequences for reference 2
  AUTHORS   Briant,L., Wade,C.M., Puel,J., Leigh Brown,A.J. and Guyader,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-APR-1995) Chris M. Wade, Centre for HIV Research,
	    ICAPB, Division of Biological Sciences, University of Edinburgh,
	    King''s Buildings, West Mains Road, Edinburgh, EH9 3JN, Scotland,
	    United Kingdom
COMMENT     V3-ID: B_FR1.ID These 4 sequences are from Toulouse, France. In
	    this study, 4 mother-infant pairs were followed during pregnancy
	    and after birth. The inter- and intra-patient sequence similarities
	    of this set of 308 sequences has been controversial, because some
	    infant sequences were identical to sequences from other mothers.
	    For purposes of this V3 section, only one sequence from each of the
	    4 infants is presented here. (Briant95), (Korber95) and (Learn96).
	    GenBank entries for all 308 sequences are found with accession
	    numbers U24717-U24999 and U25001-U25025
FEATURES             Location/Qualifiers
     source	     1..319
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="Child A: 2.5 months"
		     /db_xref="taxon:11676"
		     /clone="Cbu3.9"
     gene	     1..319
		     /gene="env"
     CDS	     <1..>319
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein, V3 region"
		     /protein_id="AAB07212.1"
		     /db_xref="GI:818367"
		     /translation="GSLAEEEVVIRSENFTNNAKTIIVQLKESVEINCTRLSNNTRRS
		     INIGPGRAFYTTGAIIGDIRQAHCNISRVKWNNTLKQIVEKLGDQFKNKTIVFTQSSG
		     GDPE"
BASE COUNT	141 a	  42 c	   64 g     72 t
ORIGIN
       1 ggcagtctag cggaagaaga ggtagtaatt aggtctgaaa atttcacgaa taatgctaaa 
      61 accataatag tacagctgaa agaatctgta gaaattaatt gtacaagact cagcaataat 
     121 acaagaagaa gtataaatat aggaccaggg agagcatttt atacaacagg agctataata 
     181 ggagatataa gacaagcaca ttgtaacatt agtagagtaa aatggaataa cactttaaaa 
     241 cagatagttg aaaaattagg agaccaattt aagaataaaa caatagtctt tactcaatcc 
     301 tcaggagggg acccagaaa
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Triad National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration
© Copyright Triad National Security, LLC. All Rights Reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health