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LOCUS HIV1U23680 621 bp DNA linear VRL 27-AUG-1996
DEFINITION Human immunodeficiency virus type 1 patient 306 sample 1990 clone 7
from USA, envelope glycoprotein (env) gene, V3-V5 region, partial
cds
ACCESSION U23680
VERSION U23680.1 GI:799085
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 621)
Show all sequences for reference 1
AUTHORS Shpaer,E.G., Delwart,E.L., Kuiken,C.L., Goudsmit,J., Bachmann,M.H.
and Mullins,J.I.
TITLE Conserved V3 loop sequences and transmission of human
immunodeficiency virus type 1
JOURNAL AIDS Res. Hum. Retroviruses 10 (12), 1679-1684 (1994)
PUBMED 7888227
REFERENCE 2 (bases 1 to 621)
Show all sequences for reference 2
AUTHORS Delwart,E.L., Busch,M.P., Kalish,M.L., Mosley,J.W. and Mullins,J.I.
TITLE Rapid molecular epidemiology of human immunodeficiency virus
transmission
JOURNAL AIDS Res. Hum. Retroviruses 11 (9), 1081-1093 (1995)
PUBMED 8554905
REFERENCE 3 (bases 1 to 621)
Show all sequences for reference 3
AUTHORS Shpaer,E.G.
TITLE Direct Submission
JOURNAL Submitted (28-MAR-1995) Eugene G. Shpaer, Applied Biosystems,
Perkin-Elmer, 850 Lincoln Centre Dr., Foster City, CA 94404, USA
COMMENT NCBI gi: 799085
FEATURES Location/Qualifiers
source 1..621
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="306 sample 1990"
/db_xref="taxon:11676"
/clone="7"
gene 1..621
/gene="env"
CDS <1..>621
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein, V3-V5 region"
/protein_id="AAB06659.1"
/db_xref="GI:799086"
/translation="EGDIVIRSENLTNNAKTIIVQLKEPVEINCTRPNNNTRRGIHIG
PGQAFYTTGEEITGDIRRAYCNISSAKWNETLKQIVIQLRKQFGNKTINFNQSTGGDI
EIVTHSFNCGGEFFYCNTTKLFNSTWRNDTNIEGSNSTESNDTITLQCRIKQIINMWQ
QVGKAMYAPPIRGPIRCSSNITGLLLTRDGGNESRNGNETFRPGGGD"
BASE COUNT 262 a 91 c 128 g 140 t
ORIGIN
1 gaaggagata tagtaattag atctgaaaat ctcacaaaca atgctaaaac cataatagta
61 cagctgaaag aacctgtaga aattaattgt acaaggccta acaacaatac aagaagaggt
121 atacatatag gaccagggca agcattttat acaacaggag aagaaataac aggagatata
181 agacgagcat attgtaacat tagtagcgca aaatggaatg aaactttaaa acagatagtt
241 atacaattaa gaaaacaatt tgggaataaa acaataaact ttaatcagtc cacaggaggg
301 gacatagaaa ttgtaacgca cagttttaat tgtggagggg aatttttcta ctgtaataca
361 acaaaactat ttaatagtac ttggaggaat gatactaata ttgaagggtc aaatagcact
421 gaaagcaatg acacaatcac actccaatgc agaataaaac aaattataaa tatgtggcag
481 caagtaggaa aagcaatgta tgctcctccc atcagaggac caattagatg ttcatcaaat
541 attacagggc tgctactaac aagagatggt ggtaatgaga gcaggaatgg gaacgagacc
601 ttcagacctg gaggaggaga t
//
last modified: Tue May 31 10:56 2022