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LOCUS HIV1U15874 480 bp DNA linear VRL 17-MAR-1998
DEFINITION Human immunodeficiency virus type 1 clone L3 envelope glycoprotein
V3-V5 loop region, partial cds
ACCESSION U15874
VERSION U15874.1 GI:687456
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 480)
Show all sequences for reference 1
AUTHORS Shankarappa,R., Gupta,P., Learn,G.H. Jr.., Rodrigo,A.G.,
Rinaldo,C.R. Jr.., Gorry,M.C., Mullins,J.I., Nara,P.L. and
Ehrlich,G.D.
TITLE Evolution of human immunodeficiency virus type 1 envelope sequences
in infected individuals with differing disease progression profiles
JOURNAL Virology 241 (2), 251-259 (1998)
PUBMED 9499799
REFERENCE 2 (bases 1 to 480)
Show all sequences for reference 2
AUTHORS Shankarappa,B.
TITLE Direct Submission
JOURNAL Submitted (13-OCT-1994) Basavaraju Shankarappa, Pathology,
University of Pittsburgh School of Medicine, Scaife Hall,
Pittsburgh, PA 15261, USA
FEATURES Location/Qualifiers
source 1..480
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="L3"
/cell_line="uncultured"
/cell_type="peripheral blood mononuclear cells"
/note="transmission through male homosexual contact"
CDS <1..>480
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein V3-V5 loop region"
/protein_id="AAC59222.1"
/db_xref="GI:687457"
/translation="NTRKGIPMGPGRAWYTTRDIIGGIRQAHCNISREKWNNTLKQIV
TKLKEQFGNKTIVFNQSSGGDPEIVMHNFNCGGEFFYCNTTQLFNSTWLSNSTWNTSK
SNNNDTITLPRRIKQIINRWQEVGKAMYAPPIEGQIRCSSNITGLLLTRDGGNNEGRM
"
BASE COUNT 193 a 72 c 101 g 114 t
ORIGIN
1 aatacaagga aaggtatacc tatgggacca gggagagcat ggtatacaac aagagacata
61 ataggaggta taagacaagc acattgtaac attagtagag aaaaatggaa caacacttta
121 aaacagatag ttacaaagtt aaaagaacaa tttgggaata aaacaatagt ctttaatcaa
181 tcctcaggag gggacccaga aattgtaatg cacaatttta attgtggagg ggaatttttc
241 tactgtaata caacacagct gtttaatagt acttggctgt ctaatagtac ttggaatact
301 agcaagtcaa ataacaatga cactatcaca ctcccacgca gaataaaaca aattataaat
361 aggtggcagg aagtaggaaa agcaatgtat gcccctccca ttgaaggaca aattagatgt
421 tcatcaaata ttacagggct gctattaaca agagatggtg gtaataacga gggtaggatg
//
last modified: Tue May 31 10:56 2022