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LOCUS HIV1U15860 489 bp DNA linear VRL 17-MAR-1998
DEFINITION Human immunodeficiency virus type 1 clone IG envelope glycoprotein
V3-V5 loop region, partial cds
ACCESSION U15860
VERSION U15860.1 GI:687428
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 489)
Show all sequences for reference 1
AUTHORS Shankarappa,R., Gupta,P., Learn,G.H. Jr.., Rodrigo,A.G.,
Rinaldo,C.R. Jr.., Gorry,M.C., Mullins,J.I., Nara,P.L. and
Ehrlich,G.D.
TITLE Evolution of human immunodeficiency virus type 1 envelope sequences
in infected individuals with differing disease progression profiles
JOURNAL Virology 241 (2), 251-259 (1998)
PUBMED 9499799
REFERENCE 2 (bases 1 to 489)
Show all sequences for reference 2
AUTHORS Shankarappa,B.
TITLE Direct Submission
JOURNAL Submitted (13-OCT-1994) Basavaraju Shankarappa, Pathology,
University of Pittsburgh School of Medicine, Scaife Hall,
Pittsburgh, PA 15261, USA
FEATURES Location/Qualifiers
source 1..489
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="IG"
/cell_line="uncultured"
/cell_type="peripheral blood mononuclear cells"
/note="transmission through male homosexual contact"
CDS <1..>489
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein V3-V5 loop region"
/protein_id="AAC59168.1"
/db_xref="GI:687429"
/translation="NTRKSIHIGPGRAFYTTGEIIGDIRQAHCYISREKWNNTLKQIV
TKLPEQFGNKTIVFNQSSGGDPEIVMHSFNCGGEFFYCNSTKLFNSTWLSNSTWNEND
TNESNNNDAITLPCRIKQIINRWQEVGKAMYAPPIGEQIRCSSNITGLPLTRDGGNNG
NGT"
BASE COUNT 197 a 73 c 101 g 118 t
ORIGIN
1 aatacaagaa aaagtataca tataggaccg gggagagcat tttatacaac aggagaaata
61 ataggagata taagacaagc acattgttac attagtagag aaaaatggaa taacacttta
121 aaacagatag ttacaaaatt accagaacaa tttgggaata aaacaatagt ctttaatcaa
181 tcctcaggag gggacccaga aattgtaatg cacagtttta attgtggagg ggaatttttc
241 tactgtaatt caacaaagct gtttaatagt acttggctgt ctaatagtac ttggaatgag
301 aatgatacta acgagtcaaa taacaatgac gctatcacac tcccatgcag aataaaacaa
361 attataaaca ggtggcagga agtaggaaaa gcaatgtatg cccctcccat cggagaacaa
421 attagatgtt catcaaatat tacagggctg ccattaacaa gagatggtgg taataacggg
481 aatgggacg
//
last modified: Tue May 31 10:56 2022