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LOCUS HIV1U15844 474 bp DNA linear VRL 17-MAR-1998
DEFINITION Human immunodeficiency virus type 1 clone G6 envelope glycoprotein
V3-V5 loop region, partial cds
ACCESSION U15844
VERSION U15844.1 GI:687396
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 474)
Show all sequences for reference 1
AUTHORS Shankarappa,R., Gupta,P., Learn,G.H. Jr.., Rodrigo,A.G.,
Rinaldo,C.R. Jr.., Gorry,M.C., Mullins,J.I., Nara,P.L. and
Ehrlich,G.D.
TITLE Evolution of human immunodeficiency virus type 1 envelope sequences
in infected individuals with differing disease progression profiles
JOURNAL Virology 241 (2), 251-259 (1998)
PUBMED 9499799
REFERENCE 2 (bases 1 to 474)
Show all sequences for reference 2
AUTHORS Shankarappa,B.
TITLE Direct Submission
JOURNAL Submitted (13-OCT-1994) Basavaraju Shankarappa, Pathology,
University of Pittsburgh School of Medicine, Scaife Hall,
Pittsburgh, PA 15261, USA
FEATURES Location/Qualifiers
source 1..474
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/host="Homo sapiens"
/db_xref="taxon:11676"
/clone="G6"
/cell_line="uncultured"
/cell_type="peripheral blood mononuclear cells"
/note="transmission through male homosexual contact"
CDS <1..>474
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein V3-V5 loop region"
/protein_id="AAC59152.1"
/db_xref="GI:687397"
/translation="NTRKSISIGPGRAFYTTGAIIGDIRQAHCNISRAKWNNTLKQIV
TKLREQFGNKTIIFNQSSGGDPEIVTHSFNCAGEFFFCNSTQLFNSTWVNGTWNNTEG
SEENITLPCRIKQIINMWQEVGKAMYAPPISGQIRCSSNITGLLLVRDGGKDESDD"
BASE COUNT 188 a 72 c 99 g 115 t
ORIGIN
1 aatacaagga aaagtatatc tataggacca gggagagcat tttatacaac aggagccata
61 ataggagata taagacaagc acattgtaac attagtagag caaaatggaa taacactcta
121 aaacagatag tcacaaaatt aagagaacaa tttgggaaca aaacaataat ctttaatcaa
181 tcctcaggag gggacccaga aattgtaacg cacagtttta attgtgcagg ggaatttttc
241 ttctgtaatt caacacaact atttaatagt acttgggtta atggtacttg gaataatact
301 gaagggtcag aagaaaatat cacactccca tgcagaataa aacaaattat aaacatgtgg
361 caggaagtag gaaaagcaat gtatgcccct cccatcagtg gacaaattag gtgttcatca
421 aatattacag ggctgctatt agtaagagat ggtggtaagg atgagagcga tgac
//
last modified: Tue May 31 10:56 2022