View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS HIVFLQ710 304 bp RNA linear VRL 09-JUL-1992
DEFINITION Human immunodeficiency virus type 1, viral sample LC03.DA10, V3
region
ACCESSION M90928
VERSION M90928.1 GI:327279
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 304)
Show all sequences for reference 1
AUTHORS Ou,C.-Y., Ciesielski,C.A., Myers,G., Bandea,C.I., Luo,C.C.,
Korber,B.T.M., Mullins,J.I., Schochetman,G., Berkelman,R.L.,
Economou,A.N., Witte,J.J., Furman,L.J., Satten,G.A., MacInnes,K.A.,
Curran,J.W. and Jaffe,H.W.
TITLE Molecular epidemiology of HIV transmission in a dental practice
JOURNAL Science 256 (5060), 1165-1171 (1992)
PUBMED 1589796
COMMENT Kindly submitted in computer readable form by the CDC (Centers for
Disease Control), Atlanta, GA. The sequence in this entry is one of
6 clone sequences over the V3 region obtained by the CDC from this
Florida control sample. Please note that for this set of sequences,
clone numbers from the V3 region do not correspond with similar
numbers from the V4C3V5 region. There are 236 sequences in this
sample group; all are env V3 sequences or env V4C3V5. They include:
dentist(13), dentist's patients pA(28), pB(34), pC(8), pD(14),
pE(11), pF(13), pG(9), pH(6) and local controls (LC), LC01(28),
LC02(11), LC03(19), LC04(6) and other LC up to LC42 (1-2 sequences
per person).
FEATURES Location/Qualifiers
source 1..304
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/db_xref="taxon:11676"
CDS <1..>304
/note="env polyprotein"
/codon_start="1"
/transl_table="1"
/protein_id="AAA44605.1"
/db_xref="GI:554912"
/translation="LAEEEIVIRSANFTDNTKIIIVQLNESVEINCTRPSNNTSKSIH
IGPGSAFYATGRIIGDIRQAHCNISKAKWNDTLKRVVIKLREHFGNKPIVFDHPSGG"
BASE COUNT 129 a 45 c 60 g 70 t
ORIGIN
1 ctagcagaag aagagatagt aattagatct gccaatttca cggacaatac taaaatcata
61 atagtacagc tgaatgaatc tgtagaaatt aattgtacaa gacccagcaa caatacaagt
121 aagagtatac atataggacc aggtagcgca ttttatgcaa caggaagaat aataggagat
181 ataagacaag cacattgtaa cattagtaaa gcaaaatgga atgacacttt aaaacgggta
241 gtaataaaat taagagaaca ttttgggaat aaaccaatag tctttgatca cccctcagga
301 gggg
//
last modified: Tue May 31 10:56 2022