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LOCUS KX016872 1518 bp RNA linear VRL 20-JUN-2016
DEFINITION HIV-1 isolate 2B3_D0_37 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION KX016872
VERSION KX016872.1 GI:1036347575
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1518)
Show all sequences for reference 1
AUTHORS Caskey,M., Klein,F., Lorenzi,J.C., Seaman,M.S., West,A.P. Jr..,
Buckley,N., Kremer,G., Nogueira,L., Braunschweig,M., Scheid,J.F.,
Horwitz,J.A., Shimeliovich,I., Ben-Avraham,S., Witmer-Pack,M.,
Platten,M., Lehmann,C., Burke,L.A., Hawthorne,T., Gorelick,R.J.,
Walker,B.D., Keler,T., Gulick,R.M., Fatkenheuer,G.,
Schlesinger,S.J. and Nussenzweig,M.C.
TITLE Viraemia suppressed in HIV-1-infected humans by broadly
neutralizing antibody 3BNC117
JOURNAL Nature 522 (7557), 487-491 (2015)
PUBMED 25855300
REFERENCE 2 (bases 1 to 1518)
Show all sequences for reference 2
AUTHORS Caskey,M., Klein,F., Lorenzi,J.C.C., Seaman,M.S., West,A.P. Jr..,
Buckley,N., Nogueira,L., Braunschweig,M., Scheid,J.F.,
Horwitz,J.A., Shimeliovich,I., Ben Avraham-Shulman,S.,
Wither-Pack,M., Platten,M., Lehmann,C., Burke,L.A., Hawthorne,T.,
Gorelick,R.J., Walker,B.D., Keler,T., Gulch,R.M., Fatkenheuer,G.,
Schlesinger,S.J. and Nussenzweig,M.C.
TITLE Direct Submission
JOURNAL Submitted (03-APR-2016) Molecular Immunology, The Rockefeller
University, 1230 York Av, New York, NY 10065, USA
COMMENT ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
sequencing ##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1518
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="2B3_D0_37"
/isolation_source="plasma"
/host="Homo sapiens; trial participant 2B3"
/db_xref="taxon:11676"
/country="USA"
/collection_date="2014"
/subtype="B"
gene 1..>1518
/gene="env"
CDS 1..>1518
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ANJ88719.1"
/db_xref="GI:1036347576"
/translation="MRVMGTGKNYQNLWKGGILLLGILMICSATEQLWVTVYYGVPVW
KEATTTLFCASDAKSYDTESHNVWATHACVPTDPNPQEIDLNVTENFNMWKNYMVDQM
HEDIISLWDQSLKPCVKLTPLCVTLNCTNWTTNITGTDTNTTGTANSSVTGAGEVKNC
SFNITNIGGKVQKEYAAFYNLDIIPIDNNTSFILRHCNTSVITQACPKVTFEPIPIHY
CAPAGYAILKCKDKKFNGTGPCRNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSE
NFTDNAKTILAQLTEPVELNCTRPGNNTRRSIHIGPGRAFYTGEIIGDIRQAHCNISR
AKWNNTLEKIVVKLREQFGRNRTIVFNQSTGGDPEIVMLSFNCGGEFFYCNTTQLFNS
TWIDKMINNTEGNETIILPCRIKQIINMWQTVGKAMYAPPIRGEIRCSSNITGLIITR
DGGYSNDTNNTEIFRPGGGNMKDNWRSELYKYKVVRIEPLGLAPTKAKRRVVQREK"
BASE COUNT 575 a 248 c 323 g 372 t
ORIGIN
1 atgagagtga tggggacagg gaagaattat caaaacttgt ggaaaggggg catcttgctc
61 cttgggatat tgatgatctg tagtgctaca gaacaattgt gggtcacagt ctattatggg
121 gtacctgtgt ggaaagaagc aaccaccact ttattctgtg catcagatgc taaatcatat
181 gacacagaga gtcataatgt ttgggccaca catgcatgtg tacccacaga ccccaaccca
241 caagaaatag acttgaatgt gacagaaaat tttaacatgt ggaaaaatta catggtagat
301 cagatgcatg aggatataat cagtttatgg gatcaaagcc taaaaccatg tgtaaagtta
361 accccactct gtgttacatt aaattgtact aattggacta ctaatatcac cggaactgat
421 actaatacca ctggaactgc gaatagcagc gtgacaggag caggagaagt aaaaaactgc
481 tcttttaata tcacaaacat aggaggtaag gtgcagaagg aatatgcagc tttttataac
541 cttgatataa taccaataga taataatact agctttatat taagacattg taatacctca
601 gtcattacac aagcttgtcc aaaggtaacc tttgaaccaa ttcctataca ttattgtgcc
661 ccggctggtt atgcgattct aaagtgtaaa gataagaagt tcaatggaac aggaccatgt
721 cgcaatgtta gtacagtaca atgtacacat ggaattaagc cagtggtatc aactcaacta
781 ctgttgaatg gcagtctagc agaggaagag gtagtaatta gatctgaaaa cttcacagat
841 aatgctaaaa ctatactagc acagctgaca gaaccagtag aacttaattg tacaagacct
901 ggcaacaata caagaagaag tatacatata ggaccaggga gagcattcta tacaggagag
961 ataataggag atataagaca agcacattgc aacattagta gagcaaaatg gaataacact
1021 ttagaaaaaa tagttgtaaa actaagagaa caatttggca ggaatagaac aatagtcttt
1081 aatcaatcta caggggggga cccagagatt gtaatgctca gttttaattg tggaggggaa
1141 tttttctact gtaatacaac acaactgttt aatagtactt ggattgataa aatgataaat
1201 aacactgaag gaaatgaaac catcatactc ccatgcagaa taaagcaaat tataaacatg
1261 tggcagacag taggaaaagc aatgtatgcc cctcccatca ggggagagat tcgctgctca
1321 tcaaatatta caggactgat aataacaaga gatggtggtt atagtaatga taccaacaac
1381 acagagatct ttagacctgg aggaggaaac atgaaggaca attggagaag tgaattgtat
1441 aaatataaag tagtaagaat tgaaccatta ggattagcac ccaccaaagc aaagagaaga
1501 gtggtgcaga gagaaaaa
//
last modified: Tue May 31 10:56 2022