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LOCUS KX016827 1560 bp RNA linear VRL 20-JUN-2016
DEFINITION HIV-1 isolate 2A3_D0_F10 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION KX016827
VERSION KX016827.1 GI:1036347485
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1560)
Show all sequences for reference 1
AUTHORS Caskey,M., Klein,F., Lorenzi,J.C., Seaman,M.S., West,A.P. Jr..,
Buckley,N., Kremer,G., Nogueira,L., Braunschweig,M., Scheid,J.F.,
Horwitz,J.A., Shimeliovich,I., Ben-Avraham,S., Witmer-Pack,M.,
Platten,M., Lehmann,C., Burke,L.A., Hawthorne,T., Gorelick,R.J.,
Walker,B.D., Keler,T., Gulick,R.M., Fatkenheuer,G.,
Schlesinger,S.J. and Nussenzweig,M.C.
TITLE Viraemia suppressed in HIV-1-infected humans by broadly
neutralizing antibody 3BNC117
JOURNAL Nature 522 (7557), 487-491 (2015)
PUBMED 25855300
REFERENCE 2 (bases 1 to 1560)
Show all sequences for reference 2
AUTHORS Caskey,M., Klein,F., Lorenzi,J.C.C., Seaman,M.S., West,A.P. Jr..,
Buckley,N., Nogueira,L., Braunschweig,M., Scheid,J.F.,
Horwitz,J.A., Shimeliovich,I., Ben Avraham-Shulman,S.,
Wither-Pack,M., Platten,M., Lehmann,C., Burke,L.A., Hawthorne,T.,
Gorelick,R.J., Walker,B.D., Keler,T., Gulch,R.M., Fatkenheuer,G.,
Schlesinger,S.J. and Nussenzweig,M.C.
TITLE Direct Submission
JOURNAL Submitted (03-APR-2016) Molecular Immunology, The Rockefeller
University, 1230 York Av, New York, NY 10065, USA
COMMENT ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
sequencing ##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1560
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="2A3_D0_F10"
/isolation_source="plasma"
/host="Homo sapiens; trial participant 2A3"
/db_xref="taxon:11676"
/country="USA"
/collection_date="2014"
/subtype="B"
gene 1..>1560
/gene="env"
CDS 1..>1560
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ANJ88674.1"
/db_xref="GI:1036347486"
/translation="MRVKEIRKNYQHWWWRWGIRLLGMLMICSAAEEQSWVTVYYGVP
VWREANTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLENVTEEFNMWKNNMV
EQMHEDIISLWDQSLKPCVKLTPLCVNLTCTNVDGNVNSTRTMFDNATLIKEGEMKNC
SFYITTSIRNERKKEYALFDSLDLMPIDNTKNTSGTKNSTNNTNSANYAVVRCNTTVI
TQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGSGECKNVSTVQCTHGIKPVVSTHL
LLNGSLAEGDIILRSQNFSDNAKNIIVQLNVSVQINCTRPNNNTRKGVHIGPGSAFYT
TGEIIGDIRKAYCNVSTEKWKETLSRIVTKLREQWNKTIIFEQPPPGGDPEIMMHTFN
CGGEFFYCNSSQLFSIWNDTAGNNTAGDNENITLPCRIRQIVNRWQEVGKAMYAPPIK
GQIKCRSNITGLILTRDGGTNNSTNETFRPGGGNMKDNWRSELYKYKVVRIEPLGVAP
TKAKRRVVQREK"
BASE COUNT 590 a 253 c 345 g 372 t
ORIGIN
1 atgagagtga aggagatcag gaagaattat cagcactggt ggtggagatg gggcatcagg
61 ctccttggga tgttaatgat ctgtagtgct gcagaagaac aatcgtgggt cacagtttat
121 tatggggtac ctgtgtggag agaagcaaac accactctat tttgtgcatc agatgctaag
181 gcatatgata cagaggtaca taatgtttgg gccacacatg cctgtgtacc cacagaccct
241 aacccacaag aagtagtatt ggaaaatgtg acagaagaat ttaacatgtg gaaaaataac
301 atggtagaac aaatgcatga ggatataatc agtttatggg atcaaagtct aaagccatgt
361 gtgaaattaa ccccactctg tgttaattta acttgcacca atgtggacgg taatgtgaac
421 agcactagga ctatgtttga caatgctact ttgataaagg aaggagaaat gaaaaactgc
481 tctttctata tcaccacaag tataagaaat gagaggaaga aagaatatgc actttttgat
541 agccttgatt taatgccaat agataataca aagaatacaa gtggtacaaa aaatagtaca
601 aataatacaa actctgcaaa ctatgcagtg gtaagatgta acaccacagt cattacacaa
661 gcctgtccaa aggtatcctt tgaaccaatt cccatacatt attgtgcccc ggctggtttt
721 gcgattctaa aatgtaatga taaaaagttc aatggatcag gagaatgtaa aaatgtcagc
781 acagtacaat gtacacatgg aattaagcca gtggtgtcaa cacacctgct gttaaatggc
841 agtctagcag aaggggatat aatacttaga tctcaaaatt tctcggacaa tgcaaaaaat
901 ataatagtac agctgaatgt atctgtacaa attaattgta caagacccaa caacaataca
961 agaaaaggtg tacatatagg accagggagt gcattctata caacaggaga gataatagga
1021 gatataagaa aagcatattg taatgttagt acagaaaaat ggaaagaaac tttgtcccgc
1081 atagttacaa aattaagaga acagtggaat aagacaataa tctttgagca acccccacca
1141 ggaggggacc cagaaattat gatgcacact tttaattgtg gaggggaatt tttctactgt
1201 aattcatcac agctgtttag catttggaat gacactgcag ggaacaatac tgctggggat
1261 aatgaaaata tcacactccc atgcagaata aggcaaattg taaacagatg gcaggaagta
1321 ggaaaagcaa tgtatgcccc tcccatcaag ggacaaatta agtgtagatc aaatattaca
1381 ggactgatat taacaagaga tgggggtact aacaacagta ccaacgagac cttcagacct
1441 ggaggaggaa atatgaagga caattggaga agtgaattat ataaatataa agtagtaaga
1501 attgaaccat taggagtagc acccaccaag gcaaagagaa gagtggtgca gagagaaaag
//
last modified: Tue May 31 10:56 2022