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LOCUS	    KJ362096		    1805 bp    RNA     linear	VRL 12-MAY-2014
DEFINITION  Simian immunodeficiency virus isolate BH66.Post.P1F2 from USA
	    envelope glycoprotein (env) gene, partial cds
ACCESSION   KJ362096
VERSION     KJ362096.1 GI:633019401
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus (SIV)
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1805)
            Show all sequences for reference 1
  AUTHORS   Mandell,D.T., Kristoff,J., Gaufin,T., Gautam,R., Ma,D., Sandler,N.,
	    Haret-Richter,G., Xu,C., Aamer,H., Dufour,J., Trichel,A.,
	    Douek,D.C., Keele,B.F., Apetrei,C. and Pandrea,I.
  TITLE     Pathogenic Features Associated with Increased Virulence upon Simian
	    Immunodeficiency Virus Cross-Species Transmission from Natural
	    Hosts.
  JOURNAL   J. Virol.. 88(12); 6778-6792 (2014)
  PUBMED    24696477
REFERENCE   2 (bases 1 to 1805)
            Show all sequences for reference 2
  AUTHORS   Del Prete,G.Q., Mandell,D.T., Keele,B.F., Hatziioannou,T.,
	    Apetrei,C. and Pandrea,I.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2014) AIDS and Cancer Virus Program, Frederick
	    National Laboratory, 1050 Boyles Street, Frederick, MD 21702, USA
COMMENT     ##Assembly-Data-START## Assembly Method Sequencher v. 5.0.1
	    Sequencing Technology Sanger dideoxy sequencing
	    ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..1805
		     /organism="Simian immunodeficiency virus"
		     /mol_type="genomic RNA"
		     /strain="SIVagm"
		     /isolate="BH66.Post.P1F2"
		     /host="Macaca nemestrina (pigtail macaque)"
		     /db_xref="taxon:11723"
		     /country="USA"
     gene	     <1..>1805
		     /gene="env"
     CDS	     <1..>1805
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AHZ44602.1"
		     /db_xref="GI:633019402"
		     /translation="GYALLKCNDHDYRGHKNCQNVSVAACTGLMNTTISTGIGINGSR
		     AENRTEIWQEDGDSTDTVIIKLNKYYNLTIRCRRPGNKTVLPVTIMAGLVFHSQKYNT
		     RLKQAWCWFGGNWTQAWKEVRETIVKLPNTTYKGTRNISQIFLQRQWGDPESENFFFN
		     CQGEFFYCKMDWFLNYLNNQSVDPYHNPCGNKGDKKCWQRTYVPCHIRQVVNDWYTLA
		     EKTYAPPREGHLECTSTATALYVELNYNSNNRTNVTLSPQIRSIWSYELGDYKLVEIK
		     PIGFAPTEVRRYTGPERQKRVPFVLGFLGFLGAAGAAMGAAATALTVQSQQLLAGILQ
		     QQKNLLAAVEQQQQMLKLTIWGVKNLNARVTALEKYLEDQARLNIWGCAFRQICHTTV
		     PWKFNNTPNWNNMTWQEWERQIGDLEGNISRTLEEAHEQEQKNLDSYQKLVSWSDFWS
		     WFDLSRWFGWLKIGFLVIAGIIGLRIVFIVIGLLRKFKAGYAPLSSLPSYNQQIHIHL
		     DKEQPGREEEPDKGGPSSDSRSYTWQREFLNHLLSPLINLLRSLINWFLTTCRHLLSP
		     LRQCLETTRQGTRSTRAYLEYGWQEFKAAAAALALA"
BASE COUNT	577 a	 370 c	  436 g    422 t
ORIGIN
       1 ggttatgccc ttttgaaatg taatgatcat gattatagag gccataagaa ctgtcaaaat 
      61 gtatcagtag cagcttgcac aggcttgatg aatactacta taagtacagg gatagggatt 
     121 aatggaagta gagcagaaaa taggacagaa atttggcaag aagatggtga tagcactgat 
     181 acagtgatta ttaagttaaa taagtactat aatttaacaa taagatgtag aagaccagga 
     241 aacaagacag tgttaccagt caccataatg gctggcctag tgtttcatag tcagaaatat 
     301 aatactaggt taaagcaggc ctggtgttgg ttcggaggaa actggacaca agcctggaaa 
     361 gaagttaggg agacaatagt aaagctgcca aacaccactt acaaaggaac caggaacata 
     421 agtcagatct tcctacaaag gcaatgggga gatccagaat ctgagaattt cttctttaat 
     481 tgccaaggag aattcttcta ttgtaaaatg gattggtttt taaattacct caataaccag 
     541 tcggtagacc cttaccacaa cccctgtggt aacaaagggg ataaaaagtg ttggcaaaga 
     601 acctatgtgc cctgccatat taggcaagtg gttaatgact ggtataccct ggccgaaaag 
     661 acttatgcgc ctcccagaga aggtcacttg gagtgtacct ctacggccac tgcactgtat 
     721 gtggagctaa attataacag taacaacaga acaaatgtga cattgagtcc tcaaataagg 
     781 tctatttggt cctatgaact aggggactac aaattggtgg aaataaaacc cattggcttt 
     841 gcaccaacag aagtaaggag atatacgggc ccagaaagac aaaaaagggt gcccttcgtg 
     901 ctagggttcc taggcttctt aggagctgct ggagctgcaa tgggtgcagc agctacggcg 
     961 ctgacggtcc agtctcagca attacttgct gggatattgc agcagcagaa gaatctgctt 
    1021 gcggcagtag agcagcagca acaaatgcta aagctcacca tttggggtgt caaaaacctc 
    1081 aatgcccgcg tcacagctct tgagaagtac ctagaggatc aggcacggtt aaatatttgg 
    1141 ggatgtgcct ttaggcaaat atgccacaca acagtgcctt ggaagtttaa taacactcca 
    1201 aattggaaca acatgacctg gcaagagtgg gagcggcaaa taggtgactt ggaagggaat 
    1261 atcagtagaa cactggaaga ggctcatgaa caagagcaga aaaatttgga ttcatatcaa 
    1321 aaactggtct cctggtcaga cttctggtcc tggtttgatc tctctcgctg gtttggctgg 
    1381 ctaaaaatag gtttcctggt catagcaggc attataggac taaggatagt gttcatagtt 
    1441 ataggattgc ttaggaaatt taaggcaggg tatgcacctc tctcctccct cccctcttat 
    1501 aatcaacaga tccatatcca cctggacaag gaacagccag gcagagaaga agagccagac 
    1561 aaaggtgggc caagcagcga cagcagatca tacacctggc agagagaatt cttgaaccac 
    1621 ctcctgagtc cattgatcaa cttgctcagg agcttgatca attggttctt gacaacttgc 
    1681 agacacctcc tcagtcccct ccgccagtgc ctggaaacca cccgacaggg aacaagatca 
    1741 acaagagctt accttgaata tgggtggcaa gaattcaaag cagcagcagc agcgctcgct 
    1801 ttggc
//
last modified: Tue May 31 10:56 2022


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