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LOCUS	    KC791317		    1069 bp    RNA     linear	VRL 12-JUN-2013
DEFINITION  HIV-1 isolate R74098 from Thailand pol protein (pol) gene, partial
	    cds
ACCESSION   KC791317
VERSION     KC791317.1 GI:510948783
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1069)
            Show all sequences for reference 1
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Comparisons of Primary HIV-1 Drug Resistance between Recent and
	    Chronic HIV-1 Infection within a Sub-Regional Cohort of Asian
	    Patients.
  JOURNAL   PLoS. One.. 8(6); e62057 (2013)
  PUBMED    23826076
REFERENCE   2 (bases 1 to 1069)
            Show all sequences for reference 2
  AUTHORS   Kiertiburanakul,S., Chaiwarith,R., Sirivichayakul,S., Ditangco,R.,
	    Jiamsakul,A., Li,P.C.K., Kantipong,P., Lee,C., Ratanasuwan,W.,
	    Kamarulzaman,A., Sohn,A.H. and Sungkanuparph,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAR-2013) Faculty of Medicine, Ramathibodi Hospital,
	    Mahidol University, 270 Rama 6 Road, Bangkok 10400, Thailand
COMMENT     ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
	    sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..1069
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="R74098"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Thailand"
		     /collection_date="03-Sep-2009"
     gene	     <1..>1069
		     /gene="pol"
     CDS	     <1..>1069
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AGN54169.1"
		     /db_xref="GI:510948784"
		     /translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVXQYDQILIEICGKRAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIDTVPVXLKPGMDGPKVKQWPLTEEPKKALTEICKEMEEEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPX
		     IXIYQYMDDLYVGSDLEIXQHRTKIEELRAHLLXWGFTTPDKKHQKEPPFLWMGYELH
		     PDXWTVQPIELPEKDSWTVNDI"
BASE COUNT	413 a	 174 c	  215 g    248 t     19 other
ORIGIN
       1 cctcaaatca ctctttggca acgaccyctt gtcacagtaa aaataggagg acagctaaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagatataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaargtaar gcaatatgat 
     181 cagatactta tagaaatttg tggaaaaagg gctataggta cagtrttagt aggacctaca 
     241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaatttccca 
     301 atyagtccta ttgacactgt accagtawca ttaaagccag gaatggatgg accaaaggtt 
     361 aaacagtggc cattgacaga ggaaccaaaa aaagcactaa cagaaatttg taaagaratg 
     421 gaagaggaag gaaaaatytc aaaaattgga cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaggatag cactaaatgg agraaattag tagatttcag agagctcaat 
     541 aaaagaactc aggacttttg ggaagttcaa ttaggaatac cgcatccagc aggtttgaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggagatgcat ayttttcagt tcctttagat 
     661 gaaagcttta gaaagtatac tgcattcacc atacctagta taaacaatga gacaccagga 
     721 atcagatatc artacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag 
     781 agtagcatga caaaaatctt agagcccttt agaataaaaa atccagahat arttatctat 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagrgcagca cagaacaaaa 
     901 atagaggagc taagagctca tctattgagm tggggattya cyacaccaga caaaaarcat 
     961 cagaaggaac ctccattcct ttggatggga tatgaactcc atcctgacar atggacagtc 
    1021 cagcctatag aactaccaga aaaagacagc tggactgtca atgatatac
//
last modified: Tue May 31 10:56 2022


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