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LOCUS	    KC203149		     690 bp    RNA     linear	VRL 19-FEB-2013
DEFINITION  HIV-1 isolate 2011.ANHUI.AQg24 from China gag protein (gag) gene,
	    partial cds
ACCESSION   KC203149
VERSION     KC203149.1 GI:451317278
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 690)
            Show all sequences for reference 1
  AUTHORS   Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R. and Su,B.
  TITLE     New Emerging Recombinant HIV-1 Strains and Close Transmission
	    Linkage of HIV-1 Strains in the Chinese MSM Population Indicate a
	    New Epidemic Risk
  JOURNAL   PLoS ONE 8 (1), E54322 (2013)
  PUBMED    23372706
REFERENCE   2 (bases 1 to 690)
            Show all sequences for reference 2
  AUTHORS   Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R., Hna,R. and
	    Su,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-NOV-2012) Anhui Provincial Center for Disease Control
	    and Prevention, Hefei, Anhui 230032, China
COMMENT     ##Assembly-Data-START## Assembly Method Seuqncher v. 5 Sequencing
	    Technology Sanger dideoxy sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..690
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="2011.ANHUI.AQg24"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="2011"
		     /note="genotype: CRF01_AE"
     gene	     <1..>690
		     /gene="gag"
     CDS	     <1..>690
		     /gene="gag"
		     /codon_start="2"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AGF35391.1"
		     /db_xref="GI:451317279"
		     /translation="ASVLSGGKLDAWEKIRLRPGGKKKYKLKHLVWASRELERFALNP
		     GLLESAXGCQQIIEQLQSTLKTGSEELKSLYNTVATLWCVHQGIXIXDTKXALDKIEE
		     XQNKSQQKTQQAAXSTGSSSKVSQNYPIVQNAQGQMVHQPISPRTLNAWVKVVEEKGF
		     NPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKETINEEAADWDRTHPVHAGP
		     IPPGQIREPRG"
BASE COUNT	272 a	 123 c	  161 g    127 t      7 other
ORIGIN
       1 agcgtcagta ttaagtgggg gaaaattaga tgcatgggaa aaaattcggt taaggccagg 
      61 gggaaagaaa aaatataagc taaaacattt agtatgggca agcagggagt tggaaagatt 
     121 cgcacttaac cctggcctgt tagaatcagc araaggatgt caacaaataa tagaacagtt 
     181 acaatcaact ctcaagacag gatcagaaga acttaaatca ttatataata cagtagcaac 
     241 cctttggtgt gtacaccaag ggataragat aamagacacc aaggmagctt tagataaaat 
     301 agaggaagya caaaataaga gccagcaaaa gacacagcag gcagcagyta gcacaggaag 
     361 cagcagcaaa gtcagccaaa attaccctat agtgcaaaat gcacaagggc aaatggtaca 
     421 tcagcctata tcwcctagaa ctttaaatgc atgggtaaaa gtagtagaag aaaagggttt 
     481 taacccagaa gtaataccca tgttctcagc attatcagag ggagccaccc cacaagattt 
     541 aaatatgatg ctaaatatag tggggggaca ccaggcagca atgcaaatgt taaaagaaac 
     601 catcaatgaa gaagctgcag attgggatag gacacaccca gtacatgcag ggcctattcc 
     661 accaggccag ataagggaac caaggggaag 
//
last modified: Tue May 31 10:56 2022


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