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LOCUS KC203128 694 bp RNA linear VRL 19-FEB-2013
DEFINITION HIV-1 isolate 2011.ANHUI.MASg127 from China gag protein (gag) gene,
partial cds
ACCESSION KC203128
VERSION KC203128.1 GI:451317236
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 694)
Show all sequences for reference 1
AUTHORS Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R. and Su,B.
TITLE New Emerging Recombinant HIV-1 Strains and Close Transmission
Linkage of HIV-1 Strains in the Chinese MSM Population Indicate a
New Epidemic Risk
JOURNAL PLoS ONE 8 (1), E54322 (2013)
PUBMED 23372706
REFERENCE 2 (bases 1 to 694)
Show all sequences for reference 2
AUTHORS Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R., Hna,R. and
Su,B.
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2012) Anhui Provincial Center for Disease Control
and Prevention, Hefei, Anhui 230032, China
COMMENT ##Assembly-Data-START## Assembly Method Sequencher v. 5 Sequencing
Technology Sanger dideoxy sequencing ##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..694
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="2011.ANHUI.MASg127"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="China"
/collection_date="2011"
/note="genotype: CRF07_BC"
gene <1..>694
/gene="gag"
CDS <1..>694
/gene="gag"
/codon_start="3"
/transl_table="1"
/product="gag protein"
/protein_id="AGF35370.1"
/db_xref="GI:451317237"
/translation="VLRGGKLDKWEKIRLRPGGKKHYMLKHLVWASRELERFALNPGL
LETSEGCKQIIKQLQPALQTGTEELRSLFNTVATLYCVHAGIDVRDTKEALDKIEEEQ
NKVQQKTQQAKEADKKVSQNYPIVQNIQGQMVHQPISPRTLNAWVKVVEEKAFSPEVI
PMFSALSEGATPQDLNTMLNTVGGHQAAMQILKDTINEEAAEWDRLHPVHAGPIAPGQ
MREPRGSDIQGN"
BASE COUNT 272 a 129 c 162 g 131 t
ORIGIN
1 cagtattaag agggggaaaa ttagataaat gggaaaaaat taggttgagg ccagggggaa
61 agaaacatta tatgctaaaa cacctagtat gggcaagcag ggagctggaa agatttgcac
121 ttaaccctgg ccttttagag acatcagaag gctgtaaaca aataataaaa cagttacaac
181 cagctcttca gacaggaaca gaggaactta gatcattatt caacacagta gcaactctct
241 attgtgtaca tgcagggata gatgtgcgag acaccaaaga agccttagac aagatagagg
301 aagaacaaaa caaagttcag caaaaaacac agcaggcaaa ggaggctgac aagaaggtca
361 gtcaaaatta tcctatagtg cagaatatcc aagggcaaat ggtacatcag cccatatcac
421 ctagaacttt aaatgcatgg gtaaaagtgg tagaagaaaa ggcttttagc ccagaagtaa
481 tacccatgtt ttcagcatta tcagaaggag ccaccccaca agatttaaac accatgctaa
541 acacagtggg gggacatcag gcagccatgc aaatattaaa agacaccatc aatgaagagg
601 ctgcagaatg ggatagatta catccagtac atgcagggcc tattgcacca ggccaaatga
661 gagaaccaag gggaagtgac atacaaggga acta
//
last modified: Tue May 31 10:56 2022