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LOCUS KC203118 657 bp RNA linear VRL 19-FEB-2013
DEFINITION HIV-1 isolate 2011.ANHUI.HFg95 from China gag protein (gag) gene,
partial cds
ACCESSION KC203118
VERSION KC203118.1 GI:451317216
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 657)
Show all sequences for reference 1
AUTHORS Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R. and Su,B.
TITLE New Emerging Recombinant HIV-1 Strains and Close Transmission
Linkage of HIV-1 Strains in the Chinese MSM Population Indicate a
New Epidemic Risk
JOURNAL PLoS ONE 8 (1), E54322 (2013)
PUBMED 23372706
REFERENCE 2 (bases 1 to 657)
Show all sequences for reference 2
AUTHORS Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R., Hna,R. and
Su,B.
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2012) Anhui Provincial Center for Disease Control
and Prevention, Hefei, Anhui 230032, China
COMMENT ##Assembly-Data-START## Assembly Method Sequencher v. 5 Sequencing
Technology Sanger dideoxy sequencing ##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..657
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="2011.ANHUI.HFg95"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="China"
/collection_date="2011"
/note="genotype: CRF07_BC"
gene <1..>657
/gene="gag"
CDS <1..>657
/gene="gag"
/codon_start="2"
/transl_table="1"
/product="gag protein"
/protein_id="AGF35360.1"
/db_xref="GI:451317217"
/translation="RGGKLDKWEKIRLRPGGKKHYMLKHLVWASRELERFALNPGLLE
TSEGCKQIMNQLQPALQTGTEELKSLFNLVATLYCVHTGIDVRDTKEALDKIEEEQNK
IQQKTQQAKEADRKVSQNYPIVQNIQGQMVHQPISPRTLNAWVKVVEEKAFSPEVIPM
FSALSEGATPQDLNTMLNTVGGHQAAMQILKDTINEEAAEWDRLHPVHAGPVAPGQMR
"
BASE COUNT 256 a 123 c 150 g 127 t 1 other
ORIGIN
1 aagaggggga aaattagata aatgggaaaa aattaggtta aggccagggg gaaagaaaca
61 ctatatgcta aaacacctag tatgggcaag cagggagctg gaaagatttg cacttaaccc
121 tggcctttta gagacatcag arggctgtaa acaaataatg aaccagttac aaccagctct
181 tcagacagga acagaagaac ttaaatcatt attcaactta gtagcaactc tctattgtgt
241 acatacaggg atagatgtgc gagacaccaa agaagcctta gacaagatag aggaagaaca
301 aaacaaaatt cagcaaaaaa cacagcaggc aaaggaggct gacaggaagg tcagtcaaaa
361 ttatcctata gtgcagaata tccaagggca aatggtacat cagcccatat cacctagaac
421 tttaaatgca tgggtaaaag tggtagaaga aaaggctttt agcccagaag taatacccat
481 gttttcagca ttatcagaag gagccacccc acaagattta aacaccatgt taaacacagt
541 ggggggacat caggcagcca tgcaaatatt aaaagacacc atcaatgaag aggctgcaga
601 atgggataga ttacatccag tacatgcagg gcctgttgca ccaggccaaa tgagaga
//
last modified: Tue May 31 10:56 2022