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LOCUS KC203114 663 bp RNA linear VRL 19-FEB-2013
DEFINITION HIV-1 isolate 2011.ANHUI.HFg84 from China gag protein (gag) gene,
partial cds
ACCESSION KC203114
VERSION KC203114.1 GI:451317208
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 663)
Show all sequences for reference 1
AUTHORS Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R. and Su,B.
TITLE New Emerging Recombinant HIV-1 Strains and Close Transmission
Linkage of HIV-1 Strains in the Chinese MSM Population Indicate a
New Epidemic Risk
JOURNAL PLoS ONE 8 (1), E54322 (2013)
PUBMED 23372706
REFERENCE 2 (bases 1 to 663)
Show all sequences for reference 2
AUTHORS Wu,J., Meng,Z., Xu,J., Lei,Y., Jin,L., Zhong,P., Han,R., Hna,R. and
Su,B.
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2012) Anhui Provincial Center for Disease Control
and Prevention, Hefei, Anhui 230032, China
COMMENT ##Assembly-Data-START## Assembly Method Sequencher v. 5 Sequencing
Technology Sanger dideoxy sequencing ##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..663
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="2011.ANHUI.HFg84"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="China"
/collection_date="2011"
/note="genotype: CRF07_BC"
gene <1..>663
/gene="gag"
CDS <1..>663
/gene="gag"
/codon_start="3"
/transl_table="1"
/product="gag protein"
/protein_id="AGF35356.1"
/db_xref="GI:451317209"
/translation="GKLDKWEKIRLRPGGKKHYMLKHLIWASRELERFALNPGLLETS
EGCKQIMSQLQPALQTGTEELRSLFNTVATLYCVHTGIDVRDTKEALDKIEEEQNKIQ
QKTQQAKEADRKVSQNYPIVQNLQGQMVHQALSPRTLNAWVKVVEEKAFSPEVIPMFS
ALSEGATPQDLNTMLNTVGGHQAAMQILKDTINEEAAEWDRLHPVHAGPIAPGQMREP
RG"
BASE COUNT 258 a 127 c 153 g 124 t 1 other
ORIGIN
1 ggggaaaatt agataaatgg gaaaaaatta ggttaaggcc agggggaaag aaacaytata
61 tgctaaaaca cctaatatgg gcaagcaggg agctggaaag atttgcactt aaccctggcc
121 ttttagagac atcagaaggc tgtaaacaaa taatgagcca gttacaacca gctcttcaga
181 caggaacaga ggaacttaga tcattattca acacagtagc aactctctat tgtgtacata
241 cagggataga tgtgcgagac accaaagaag ccttagacaa gatagaggaa gaacaaaaca
301 aaattcagca aaaaacacag caggcaaaag aggctgacag gaaggtcagt caaaattatc
361 ctatagtgca gaatctccaa gggcaaatgg tacatcaggc cctatcacct agaactttaa
421 atgcatgggt aaaagtggta gaagaaaagg cttttagccc agaagtaata cccatgtttt
481 cagcattatc agaaggagcc accccacaag atttaaacac catgctaaac acagtggggg
541 gacatcaggc agccatgcaa atattaaaag acaccatcaa tgaagaggct gcagaatggg
601 atagattaca tccagtacat gcagggccta ttgcaccagg ccaaatgaga gaaccaaggg
661 gaa
//
last modified: Tue May 31 10:56 2022