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LOCUS KC133248 1442 bp DNA linear VRL 19-AUG-2013
DEFINITION HIV-1 isolate W41CanoYeri from Venezuela Pol protein (pol) gene,
partial cds
ACCESSION KC133248
VERSION KC133248.1 GI:530659877
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1442)
Show all sequences for reference 1
AUTHORS Villalba,J.A., Bello,G., Maes,M., Sulbaran,Y.F., Garzaro,D.,
Loureiro,C.L., Rangel,H.R., de Waard,J.H. and Pujol,F.H.
TITLE HIV-1 epidemic in Warao Amerindians from Venezuela: spatial
phylodynamics and epidemiological patterns
JOURNAL AIDS 27 (11), 1783-1791 (2013)
PUBMED 23435304
REFERENCE 2 (bases 1 to 1442)
Show all sequences for reference 2
AUTHORS Villalba,J.A., Bello,G., Maes,M., Sulbaran,Y.F., Garzaro,D.,
Loureiro,C.L., Rangel,H.R., de Waard,J.H. and Pujol,F.H.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2012) Centro de Microbiologia y Biologia Celular,
Laboratorio de Virologia Molecular, Instituto Venezolano de
Investigaciones Cientificas, Km 11, Carretera Panamericana, Altos
De Pipe, Miranda 1020-A, Caracas-Venezuela
FEATURES Location/Qualifiers
source 1..1442
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="W41CanoYeri"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Venezuela"
/collection_date="2011"
/note="subtype: B"
gene <1..>1442
/gene="pol"
CDS <1..>1442
/gene="pol"
/codon_start="3"
/transl_table="1"
/product="Pol protein"
/protein_id="AGT38323.1"
/db_xref="GI:530659878"
/translation="QGEAGKFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGADR
QGAVSFSXPQITLWQRPLVPIRIGGQIKEALLDTGADDTVLEEINLPGRWKPKMIGGI
GGFIKVRQYDQIPVEICGHKAVGTVLVGPTPVNIIGRNLLTQLGCTLNFPISPIETVP
VKLKPGMDGPRVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKD
STKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFR
KYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKQNPDIVIYQY
MDDLYVGSDLEIGQHRTKIEELRRHLLXWGLTTPDKKHQKEPPFLWMGYELHPDKWTV
QPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTEVISLTEEA
ELELAENREILKEPVHGVYYDPSKDLIAEX"
BASE COUNT 554 a 255 c 316 g 313 t 4 other
ORIGIN
1 cacaagggga ggccgggaaa ttttcttcag agcagaccag agccaacagc cccaccagaa
61 gagagcttca ggtttgggga agagacaaca actccctctc agaagcaggg gccgatagac
121 aaggagccga tagacaagga gctgtatcct tcagcytccc tcaaatcact ctttggcaac
181 gacccctcgt cccaataagg ataggggggc aaataaaaga agctctatta gatacaggag
241 cagatgatac agtattagaa gaaataaatt tgccaggaag atggaaacca aaaatgatag
301 gaggaattgg aggttttatc aaagtaagac agtatgatca gatacccgtg gaaatctgtg
361 gccataaagc tgtaggtaca gtattagtag gacccacacc tgtcaacata attggaagaa
421 atctgttgac tcagcttggg tgcacgttaa attttcctat tagtcctatt gaaactgtac
481 cagtaaaatt aaagccagga atggatggcc caagagttaa acaatggcca ctgacagaag
541 aaaaaataaa agcattagta gaaatttgta cagaaatgga aaaggaagga aaaatttcaa
601 aaattgggcc tgaaaatcca tacaatactc cagtatttgc cataaagaaa aaagacagta
661 ctaaatggag aaaattagta gattttagag aacttaataa gagaactcaa gacttctggg
721 aagtccaatt agggataccg catcccgcag ggttaaaaaa gaaaaaatca gtaacagtat
781 tggatgtggg tgatgcatat ttttcagttc ccttagataa agacttcagg aaatatactg
841 catttaccat acctagcaca aacaatgaaa caccagggat tagatatcag tacaatgtgc
901 ttccacaggg atggaaagga tcaccagcaa tatttcaaag tagcatgata aaaatcttag
961 agccttttag gaaacaaaat ccagacatag ttatctatca atacatggat gatctrtatg
1021 taggatctga cttagaaata gggcagcata gaacaaaaat agaagaactg agacggcatc
1081 tgttgargtg ggggttgacc acaccagaca aaaagcatca gaaagaacct ccattccttt
1141 ggatgggtta tgaactccat cctgataaat ggacagtaca acctatagtg ctgccagaaa
1201 aggacagctg gactgtcaat gacatacaaa agttagtggg aaaattgaat tgggcaagtc
1261 agatttacgc agggatcaaa gtaaagcaat tatgtaaact ccttagggga accaaagcac
1321 taacagaagt aatatcacta acagaagaag cagaactaga actggcagaa aacagggaaa
1381 ttctaaaaga accagtacat ggagtgtatt atgacccatc aaaagactta atagcagaar
1441 ta
//
last modified: Tue May 31 10:56 2022