HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    JX446716		    8985 bp    RNA     linear	VRL 12-OCT-2012
DEFINITION  HIV-1 isolate AA004a_wg5 from Thailand gag protein (gag) gene,
	    complete cds; pol protein (pol) gene, partial cds; and vif protein
	    (vif), vpr protein (vpr), vpu protein (vpu), envelope glycoprotein
	    (env), and nef protein (nef) genes, complete cds
ACCESSION   JX446716
VERSION     JX446716.1 GI:407732151
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 8985)
            Show all sequences for reference 1
  AUTHORS   Rolland,M., Edlefsen,P.T., Larsen,B.B., Tovanabutra,S.,
	    Sanders-Buell,E., Hertz,T., deCamp,A.C., Carrico,C., Menis,S.,
	    Magaret,C.A., Ahmed,H., Juraska,M., Chen,L., Konopa,P., Nariya,S.,
	    Stoddard,J.N., Wong,K., Zhao,H., Deng,W., Maust,B.S., Bose,M.,
	    Howell,S., Bates,A., Lazzaro,M., O'Sullivan,A., Lei,E.,
	    Bradfield,A., Ibitamuno,G., Assawadarachai,V., O'Connell,R.J.,
	    deSouza,M.S., Nitayaphan,S., RERKS-NGARM,S., Robb,M.L.,
	    McLellan,J.S., Georgiev,I., Kwong,P.D., Carlson,J.M., Michael,N.L.,
	    Schief,W.R., Gilbert,P.B., Mullins,J.I. and Kim,J.H.
  TITLE     Increased HIV-1 vaccine efficacy against viruses with genetic
	    signatures in Env V2.
  JOURNAL   Nature.. 490(7420); 417-20 (2012)
  PUBMED    22960785
REFERENCE   2 (bases 1 to 8985)
            Show all sequences for reference 2
  AUTHORS   Rolland,M., Edlefsen,P.T., Larsen,B.B., Tovanabutra,S.,
	    Sanders-Buell,E., Hertz,T., de Camp,A.C., Carrico,C., Menis,S.,
	    Magaret,C.A., Ahmed,H., Juraska,M., Chen,L., Konopa,P., Nariya,S.,
	    Stoddard,J.N., Wong,K., Zhao,H., Deng,W., Maust,B.S., Bose,M.,
	    Howell,S., Bates,A., Lazzaro,M., O'Sullivan,A., Lei,E.,
	    Bradfield,A., Ibitamuno,G., Assawadarachai,V., O'Connell,R.J., de
	    Souza,M.S., Nitayaphan,S., RERKS-NGARM,S., Robb,M.L.,
	    McLellan,J.S., Georgiev,I., Kwong,P.D., Carlson,J.M., Michael,N.L.,
	    Schief,W.R., Gilbert,P.B., Mullins,J.I. and Kim,J.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-AUG-2012) US Military HIV Research Program, 503
	    Robert Grant Ave, Silver Spring, MD 20910, USA
COMMENT     ##Assembly-Data-START## Sequencing Technology Sanger dideoxy
	    sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source	     1..8985
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="AA004a_wg5"
		     /isolation_source="plasma AA004a"
		     /host="Homo sapiens; RV144 trial participant AA004"
		     /db_xref="taxon:11676"
		     /country="Thailand"
		     /collection_date="2005"
		     /note="subtype: CRF01_AE"
     gene	     194..1690
		     /gene="gag"
     CDS	     194..1690
		     /gene="gag"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AFU26100.1"
		     /db_xref="GI:407732152"
		     /translation="MGARASVLSGGKLDRWEKIRLRPGGKKKYRLKHLIWASREVERF
		     ALNPGLLETAEGCQQLIEQLQSALKTGSEELKSLFNTIATLWCVHQGIDIKDTKEALD
		     KMEEAQNKSQQKTQQAVADTGSSSKVSQNYPILQNAQGQMIHQPFSPRTLNAWVKVVE
		     EKGFNPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQILKETINEEAAEWDRVHPV
		     HAGPIPPGQMREPRGSDIAGTTSNLQEQIGWMTGNPAIPVGDIYKRWIILGLNKIVRM
		     YRPVSILDIKQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKSIL
		     KALGTGATLEEMMTACQGVGGPSHKARVLAEAMSHVQQVNVMMQRGNFKGQKRIKCFN
		     CGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSNKGRPGNFPQSR
		     PEPTAPPAEYWGMGEEITPSLKQEQKDKEQPSPVVSLKSLFGNDPLSQ"
     misc_feature    197..589
		     /gene="gag"
		     /note="gag gene protein p17 (matrix protein); Region:
		     Gag_p17; pfam00540"
		     /db_xref="CDD:109591"
     misc_feature    638..1282
		     /gene="gag"
		     /note="gag gene protein p24 (core nucleocapsid protein);
		     Region: Gag_p24; pfam00607"
		     /db_xref="CDD:201337"
     misc_feature    1355..1408
		     /gene="gag"
		     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
		     /db_xref="CDD:189387"
     misc_feature    1418..1471
		     /gene="gag"
		     /note="Zinc knuckle; Region: zf-CCHC; pfam00098"
		     /db_xref="CDD:189387"
     misc_feature    1532..1636
		     /gene="gag"
		     /note="Gag protein p6; Region: Gag_p6; pfam08705"
		     /db_xref="CDD:149684"
     gene	     <1483..4494
		     /gene="pol"
     CDS	     <1483..4494
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AFU26101.1"
		     /db_xref="GI:407732153"
		     /translation="FFRENLAFQQGKAGKFSSEQTRTNSPASRILGDGGRDNPLTEAG
		     AERQGTAFSCSFPQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEDINLPGKWKPKM
		     IGGIGGFIKVKQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPI
		     DTVPVKLKPGMDGPKVKQWPLTEEKIKALTEICEEMEKEGKISKIGPENPYNTPVFAI
		     KKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLD
		     ESFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPEVV
		     IYQYMDDLYVGSDLEIGQHRIKVEELRAHLLSWGLTTPDKKHQKEPPFLWMGYELHPD
		     RWTVQPIELPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGAKTLTDIVPL
		     TEEAELELAENREILKTPVHGVYYDPSKDLVAEVQKQGQDQWTYQIYQDQFKNLKTGK
		     YARKRSAHTNDVRQLAEVVQKIATESIVIWGKTPKFRLPIQRETWETWWTDYWQATWI
		     PEWEFVNTPPLVKLWYQLEKDPIAGAETFYVDGAASRETKLGKAGYVTDRGRQKVVSL
		     TETTNQKTELHAIHLALQDSGSEVNIVTDSQYALGIIQAQPDRSESEVVNQIIEELIR
		     KEKVYLSWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEEHERYHSNWRTMASD
		     FNLPPVVAKEIVASCDKCQQKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGY
		     IEAEVIPAETGQETAYFLLKLAGRWPVKVIHTDNGSNFTSAAVKAACWWANVRQEFGI
		     PYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGER
		     IIDIIATDLQTKELQKQITKIQNFRVYYRDSRDPIWKGPAKLLWKGEGAVVIQDNSDI
		     KVVPRRKAKIIRDYGKQMAGDDCVAGRQDED"
     misc_feature    1681..1923
		     /gene="pol"
		     /note="Retropepsins, pepsin-like aspartate proteases;
		     Region: HIV_retropepsin_like; cd05482"
		     /db_xref="CDD:133149"
     misc_feature    order(1723..1725,1729..1731,1735..1737,1786..1794,1900..19
		     02)
		     /gene="pol"
		     /note="inhibitor binding site; inhibition site"
		     /db_xref="CDD:133149"
     misc_feature    1723..1731
		     /gene="pol"
		     /note="catalytic motif [active]"
		     /db_xref="CDD:133149"
     misc_feature    1723..1725
		     /gene="pol"
		     /note="Catalytic residue [active]"
		     /db_xref="CDD:133149"
     misc_feature    order(1786..1800,1804..1818)
		     /gene="pol"
		     /note="Active site flap [active]"
		     /db_xref="CDD:133149"
     misc_feature    1999..2649
		     /gene="pol"
		     /note="RT_Rtv: Reverse transcriptases (RTs) from
		     retroviruses (Rtvs). RTs catalyze the conversion of
		     single-stranded RNA into double-stranded viral DNA for
		     integration into host chromosomes. Proteins in this
		     subfamily contain long terminal repeats (LTRs) and...;
		     Region: RT_Rtv; cd01645"
		     /db_xref="CDD:73152"
     misc_feature    order(2017..2022,2128..2130,2140..2142,2161..2163,2167..21
		     75,2179..2181,2188..2190,2212..2214,2218..2223,2227..2229,
		     2275..2292,2398..2403,2407..2409,2416..2418,2494..2496,250
		     0..2505,2635..2640)
		     /gene="pol"
		     /note="active site"
		     /db_xref="CDD:73152"
     misc_feature    order(2017..2022,2167..2175,2179..2181,2188..2190,2212..22
		     14,2218..2223,2227..2229,2401..2403,2407..2409,2416..2418,
		     2494..2496,2635..2640)
		     /gene="pol"
		     /note="DNA binding site [nucleotide binding]"
		     /db_xref="CDD:73152"
     misc_feature    2134..2649
		     /gene="pol"
		     /note="Reverse transcriptase (RNA-dependent DNA
		     polymerase); Region: RVT_1; pfam00078"
		     /db_xref="CDD:200982"
     misc_feature    order(2140..2142,2161..2163,2275..2292,2398..2400,2500..25
		     02)
		     /gene="pol"
		     /note="dNTP binding site [chemical binding]; other site"
		     /db_xref="CDD:73152"
     misc_feature    order(2245..2256,2482..2484,2488..2490,2509..2511,2515..25
		     17,2626..2628)
		     /gene="pol"
		     /note="NNRTI binding site; other site"
		     /db_xref="CDD:73152"
     misc_feature    2659..2868
		     /gene="pol"
		     /note="Reverse transcriptase thumb domain; Region:
		     RVT_thumb; pfam06817"
		     /db_xref="CDD:115473"
     misc_feature    2896..3204
		     /gene="pol"
		     /note="Reverse transcriptase connection domain; Region:
		     RVT_connect; pfam06815"
		     /db_xref="CDD:203523"
     misc_feature    3262..3600
		     /gene="pol"
		     /note="non-LTR RNase HI domain of reverse transcriptases;
		     Region: Rnase_HI_RT_non_LTR; cd09276"
		     /db_xref="CDD:187700"
     misc_feature    order(3274..3276,3379..3381,3439..3441,3592..3594)
		     /gene="pol"
		     /note="active site"
		     /db_xref="CDD:187700"
     misc_feature    order(3274..3282,3286..3288,3364..3372,3379..3381,3439..34
		     41,3550..3552)
		     /gene="pol"
		     /note="RNA/DNA hybrid binding site [nucleotide binding];
		     other site"
		     /db_xref="CDD:187700"
     misc_feature    3649..3768
		     /gene="pol"
		     /note="Integrase Zinc binding domain; Region:
		     Integrase_Zn; pfam02022"
		     /db_xref="CDD:202092"
     misc_feature    3799..4113
		     /gene="pol"
		     /note="Integrase core domain; Region: rve; pfam00665"
		     /db_xref="CDD:201381"
     misc_feature    4285..4437
		     /gene="pol"
		     /note="Integrase DNA binding domain; Region: IN_DBD_C;
		     pfam00552"
		     /db_xref="CDD:144223"
     gene	     4439..5017
		     /gene="vif"
     CDS	     4439..5017
		     /gene="vif"
		     /codon_start="1"
		     /transl_table="1"
		     /product="vif protein"
		     /protein_id="AFU26102.1"
		     /db_xref="GI:407732154"
		     /translation="MENRWQVMIVWQVDRMRIRTWNSLVKHHMYVSKKAKNWFYRHHY
		     ESQHPKVSSEVHIPLGEARLIIRTYWGLQTGEKDWQLGHGVSIEWRQRRYSTQIDPDL
		     ADQLIHLQYFDCFSDSAIRRAILGQVVRHRCEYPSGHNKVGSLQYLALKALTTPKRIR
		     PPLPSVKKLTEDRWNKPQKIKGHREYPTMNGH"
     misc_feature    4439..5014
		     /gene="vif"
		     /note="Retroviral Vif (Viral infectivity) protein; Region:
		     Vif; pfam00559"
		     /db_xref="CDD:109609"
     gene	     4957..5247
		     /gene="vpr"
     CDS	     4957..5247
		     /gene="vpr"
		     /codon_start="1"
		     /transl_table="1"
		     /product="vpr protein"
		     /protein_id="AFU26103.1"
		     /db_xref="GI:407732155"
		     /translation="MEQAPEDQGPQRVPYNEWTLELLEELKNEAVXHFPRPWLHGLGQ
		     YIYNTYGDTWEGVEAIIRILQQLLFVHFRIGCQHSRIGILPGRRGRNGAGRS"
     misc_feature    4957..5205
		     /gene="vpr"
		     /note="VPR/VPX protein; Region: VPR; pfam00522"
		     /db_xref="CDD:109573"
     gene	     5463..5708
		     /gene="vpu"
     CDS	     5463..5708
		     /gene="vpu"
		     /codon_start="1"
		     /transl_table="1"
		     /product="vpu protein"
		     /protein_id="AFU26104.1"
		     /db_xref="GI:407732156"
		     /translation="MTPLEISAIVGLIVALILAIVVWTIVALEYRKILKQRKIDRLLK
		     RISERAEDSGNESEGDTDELAKLVELGDFDPWVGDNL"
     misc_feature    <5547..5684
		     /gene="vpu"
		     /note="Vpu protein; Region: Vpu; pfam00558"
		     /db_xref="CDD:109608"
     gene	     5626..8223
		     /gene="env"
     CDS	     5626..8223
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFU26105.1"
		     /db_xref="GI:407732157"
		     /translation="MRVKGTQMNWPNLWNWGTLILGLVIICSASSNLWVTVYYGVPVW
		     RDANTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIPLENVTENFNMWKNNMVEQ
		     MQEDVISLWDQSLKPCVKLTPLCVTLNCTDAKSTQVNITKDPKTGNITLKNITEEVKN
		     CSFNMTTEIHDRKQKVHALFYKLDIVPIDSNSSNRDSRYMLINCNTSAIKQACPKISF
		     DPIPIHYCTPAGYALLKCKDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEE
		     EIIIRSENITDNAKTIIVHLNEPVEINCTRPSNNTRTSTNIGPGRVFYRTGEIIGDIR
		     QAYCKVDRTNWNKNLEQVAGKLKEHFNNTIIFQPPSPGGDLEITMHHFNCRGEFFYCN
		     TSELFSSTWYKNGTNTTKWDNDTIILTCRIKQIINMWQEVGQAMYAPPISGVINCVSN
		     ITGILLTRDGGGLNNTNETFRPTGGNIKDNWRSELYKYKVVQIEPLGIAPTRAKRRVV
		     EREKRAIGIGALIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQH
		     LLQLTVWGIKQLQARVLAVERYLKDQEFLGLWGCSGKIICTTAVPWNSTWSNRTYDEI
		     WGNMTWIEWEREISNYTGQIYEILTESQNQQNKNEKDLLELDQWASLWNWFSITKWLW
		     YIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTPTHHQREPDRPERIEEEGG
		     EQGRDRSVRLVSGFLALAWDDLRSLCLFSYHRLRDFILVAARIVEILGHSSLKGLRRG
		     WEGLKYLGNLLVYWGRELRISAISLLDTTAIAVAGWTDRVIEVVQRAWRAFLHIPRRI
		     RQGLERALL"
     misc_feature    5722..7128
		     /gene="env"
		     /note="Envelope glycoprotein GP120; Region: GP120;
		     pfam00516"
		     /db_xref="CDD:109567"
     misc_feature    7246..7626
		     /gene="env"
		     /note="heptad repeat 1-heptad repeat 2 region (ectodomain)
		     of the gp41 subunit of human immunodeficiency virus
		     (HIV-1), and related domains; Region: HIV-1-like_HR1-HR2;
		     cd09909"
		     /db_xref="CDD:197369"
     misc_feature    order(7246..7305,7312..7410)
		     /gene="env"
		     /note="HR1; other site"
		     /db_xref="CDD:197369"
     misc_feature    order(7252..7254,7258..7266,7270..7287,7291..7305,7312..73
		     29,7333..7350,7354..7362,7366..7371,7375..7380,7387..7392,
		     7396..7404,7408..7434,7447..7449,7453..7455,7459..7470,749
		     8..7503,7510..7515,7522..7524,7531..7536,7543..7548,7552..
		     7557,7564..7569,7573..7578,7585..7590,7606..7611,7618..762
		     0)
		     /gene="env"
		     /note="homotrimer interface [polypeptide binding]; other
		     site"
		     /db_xref="CDD:197369"
     misc_feature    order(7498..7557,7561..7596,7600..7626)
		     /gene="env"
		     /note="HR2; other site"
		     /db_xref="CDD:197369"
     gene	     8225..8842
		     /gene="nef"
     CDS	     8225..8842
		     /gene="nef"
		     /codon_start="1"
		     /transl_table="1"
		     /product="nef protein"
		     /protein_id="AFU26106.1"
		     /db_xref="GI:407732158"
		     /translation="MGGKWSKSSIVGWPQVRERIRQTPPAAEGVGAVSQDLDKHGAVT
		     SSNMNNADCVWLEAQQEEEEVGFPVRPQVPLRPMTFKGAFDLSFFLKEKGGLDGLIYS
		     KKRQEILDLWVYHTQGFFPDWHNYTPGPGIRYPLCFGWCFKLVPVDPKEVEENNKEEN
		     SCLLHPMSQHGIDDEDREVLMWKFDSALARRHIAREMHPEFYKDC"
     misc_feature    8228..8836
		     /gene="nef"
		     /note="Negative factor, (F-Protein) or Nef; Region:
		     F-protein; pfam00469"
		     /db_xref="CDD:109523"
BASE COUNT     3258 a	1558 c	 2170 g   1996 t      3 other
ORIGIN
       1 tgagaaaaat ctctagcagt ggcgcccgaa cagggacttg aaagcgaaag ttaataggga 
      61 ctcgaaagcg aaagttccag agaagttctc tcgacgcagg actcggcttg ctgrggtgca 
     121 cacagcaaga ggcgagagcg gcgactggtg agtacgccaa agtttttgac tagcggaggc 
     181 tagaaggaga gagatgggtg cgagagcgtc agtattaagt gggggaaaat tagatagatg 
     241 ggaaaaaatt cggttacggc cagggggaaa gaaaaaatat aggttgaaac atttaatatg 
     301 ggcaagcaga gaggtagaaa gattcgcact taaccctggc cttttagaaa cagcagaagg 
     361 atgtcaacaa ctaatagaac agttacagtc agctctcaag acaggatcag aagaacttaa 
     421 atcattattt aatacaatag caaccctctg gtgcgtacac caagggatag atataaaaga 
     481 caccaaggaa gctttagata aaatggagga agcacaaaat aagagccagc aaaagacaca 
     541 gcaggcggta gctgacacag gaagcagcag caaagtcagc caaaattacc ctatactgca 
     601 aaatgcacaa gggcaaatga tacatcagcc tttctcacct agaactttga atgcatgggt 
     661 gaaagtagta gaagaaaagg gtttcaaccc agaagtaata cccatgttct cagcattatc 
     721 agagggagcc accccacaag atttaaatat gatgctgaat atagtagggg gacaccaggc 
     781 agcaatgcaa atattaaaag agaccatcaa tgaggaagct gcagaatggg atagggtaca 
     841 cccagtacat gcagggccta ttccaccagg ccagatgagg gaaccaaggg gaagtgatat 
     901 agcaggaact actagtaacc ttcaagaaca aataggatgg atgacaggca atccagctat 
     961 cccagtggga gacatctata aaaggtggat aatcctggga ttaaataaaa tagtaagaat 
    1021 gtatagacct gttagcattt tggacataaa acaagggcca aaagaaccct tcagagacta 
    1081 tgtggatagg ttctataaaa ctctcagagc agaacaagct acacaggagg taaaaaactg 
    1141 gatgacagaa accttgctag tccaaaatgc aaatccagac tgtaagtcca ttttaaaagc 
    1201 attagggaca ggggctacat tagaagaaat gatgacagca tgtcagggag tgggaggacc 
    1261 tagccataaa gcaagggttt tggctgaggc aatgagccac gtacaacagg taaatgtaat 
    1321 gatgcagaga ggcaatttta agggccagaa aagaattaag tgcttcaact gtggcaaaga 
    1381 aggacaccta gccagaaatt gcagggcccc tagaaaaaag ggttgttgga aatgtgggaa 
    1441 ggaaggacat caaatgaaag actgcactga gagacaggct aattttttag ggaaaatttg 
    1501 gccttccaac aagggaaggc cgggaaattt tcctcagagc agaccagaac caacagcccc 
    1561 gccagcagaa tattggggga tgggggaaga gataaccccc tcactgaagc aggagcagaa 
    1621 agacaaggaa cagccttctc ctgtagtttc cctcaaatca ctctttggca acgacccctt 
    1681 gtcacagtaa aaataggagg acagctgaaa gaagctctat tagatacagg agcagatgat 
    1741 acagtattag aagatataaa tttgccagga aaatggaaac caaaaatgat agggggaatt 
    1801 ggaggtttta tcaaggtaaa gcaatatgat cagatactta tagaaatttg tggaaaaaag 
    1861 gcgataggta cagtattagt gggacctaca cctgtcaaca taattggacg aaatatgttg 
    1921 actcagattg gttgtacttt aaatttccca attagtccta ttgacactgt accagtaaaa 
    1981 ttaaagccag ggatggatgg accaaaggtt aaacagtggc cattgacaga agaaaaaata 
    2041 aaagcattaa cagaaatttg tgaagagatg gaaaaggaag gaaaaatctc aaaaattggg 
    2101 cctgaaaatc catacaatac tccagtattc gctataaaga aaaaggacag cactaaatgg 
    2161 agaaaattag tagatttcag agagctcaat aaaagaactc aggacttttg ggaagttcaa 
    2221 ttaggtatac cacatccagc aggtttaaaa aagaaaaaat ctgtaacagt actagatgtg 
    2281 ggagatgcat atttttcagt tcctttagat gaaagcttta gaaagtatac tgcattcacc 
    2341 atacctagca caaacaatga gacaccagga atcagatatc agtacaatgt gttgccacag 
    2401 ggatggaaag gatcaccggc aatattccag agtagcatga caaaaatctt agagcccttt 
    2461 agaataaaaa atccagaagt ggttatctat caatacatgg atgacctata tgtaggatct 
    2521 gatttagaaa tagggcagca cagaataaaa gtagaggagc taagagctca tctattgagc 
    2581 tggggactta ctacaccaga taaaaagcat cagaaggaac ctccattcct ctggatggga 
    2641 tatgaactcc atcctgacag atggacagtc cagcctatag aattgccaga aaaagacagt 
    2701 tggactgtca atgatataca gaaattagtg ggaaaactaa attgggcaag tcaaatttat 
    2761 gcagggatta aggtaagaca actgtgtaaa cttctcagag gagctaaaac attaacagac 
    2821 atagtaccat tgactgaaga agcagaatta gagttggcag agaacaggga gattctaaaa 
    2881 accccggtgc atggagtata ttatgaccca tcaaaagact tagtagcaga agtacagaaa 
    2941 caagggcagg accaatggac atatcaaatt tatcaagatc aatttaaaaa tctaaaaaca 
    3001 ggaaaatatg ccagaaaaag gtctgctcac actaatgatg taagacaatt agcagaagtg 
    3061 gtgcaaaaaa tagccacaga aagcatagta atatggggaa agacccctaa atttagacta 
    3121 cccatacaaa gagaaacatg ggaaacatgg tggacggatt attggcaggc tacctggatt 
    3181 cctgagtggg agtttgttaa tacccctcct ctagtaaaat tatggtacca attagaaaaa 
    3241 gaccccatag caggagcaga gactttctat gtagatgggg cagctagtag ggagactaaa 
    3301 ctagggaaag cagggtatgt cactgacaga ggaagacaaa aggtagtttc cctaactgag 
    3361 acaacaaatc aaaagactga actacatgct atccatttag ccttgcagga ttcaggatca 
    3421 gaagtaaata tagtaacaga ctcacaatat gcattaggaa tcattcaggc acaaccagac 
    3481 aggagtgaat cagaagtagt caaccaaata atagaggagc taataagaaa ggaaaaggtc 
    3541 tacctgtcat gggtaccagc acataagggg attggaggaa atgagcaagt agataaatta 
    3601 gtcagttcag gaatcaggaa ggtgctattt ttagatggga tagataaggc tcaagaagaa 
    3661 catgaaagat atcacagcaa ttggagaaca atggctagtg atttcaattt gccaccggta 
    3721 gtagcaaagg aaatagtagc cagctgtgat aaatgtcaac aaaaagggga agctatgcat 
    3781 ggacaagtgg actgtagtcc agggatatgg caattagatt gcacacatct agaaggaaaa 
    3841 gtcatcctag tagcagtcca cgtggccagt ggatatatag aagcagaagt tatcccagca 
    3901 gaaacaggac aggagacagc atactttctg ctaaaattag caggacgatg gccagtaaaa 
    3961 gtaatacaca cagacaatgg tagcaatttc accagcgctg cagttaaagc agcctgttgg 
    4021 tgggccaatg tccgacagga atttgggatc ccctacaatc cccaaagtca aggagtagta 
    4081 gaatctatga ataaagaatt aaagaaaatc atagggcaag taagagagca agctgagcac 
    4141 cttaagacag cagtacaaat ggcagtattc attcacaatt ttaaaagaaa aggggggatt 
    4201 ggggggtaca gtgcagggga aagaataata gacataatag caacagactt acaaactaaa 
    4261 gaattacaaa aacaaattac aaaaattcaa aattttcggg tttattacag ggacagcaga 
    4321 gacccaattt ggaaaggacc agcaaaacta ctctggaaag gtgaaggggc agtagtaata 
    4381 caagacaata gtgatataaa agtagtacca agaagaaaag caaagatcat tagggattat 
    4441 ggaaaacaga tggcaggtga tgattgtgtg gcaggtagac aggatgagga ttagaacatg 
    4501 gaacagttta gtaaaacatc atatgtatgt ttcaaagaaa gctaaaaatt ggttttatag 
    4561 acaccattat gaaagccagc atccaaaggt aagttcagaa gtacatatcc cactaggaga 
    4621 ggctagatta ataataagaa catattgggg tctgcagaca ggagaaaagg attggcaatt 
    4681 gggtcatgga gtctccatag aatggaggca gagaaggtat agcacacaaa tagatcctga 
    4741 cctagcagac caactgattc atctacaata ttttgactgt ttttcagact ctgccataag 
    4801 gagagccata ttaggacaag tagttagaca taggtgtgaa tatccatcag gacataacaa 
    4861 ggtaggatcc ctacaatatt tggcactgaa agcattaaca acaccaaaaa ggataaggcc 
    4921 acctctgcct agtgttaaaa aattaacaga agatagatgg aacaagcccc agaagatcaa 
    4981 gggccacaga gagtacccta caatgaatgg acattagaac tattagagga gcttaaaaat 
    5041 gaagctgttr gacattttcc taggccctgg ctccatggct taggacaata catctataac 
    5101 acttatgggg atacttggga aggggttgaa gctataataa gaattttgca acaactactg 
    5161 tttgttcatt tcagaattgg gtgtcaacat agcagaatag gcattttgcc agggagaaga 
    5221 ggcaggaatg gagctggtag atcctaacct agagccctgg aatcatccgg gaagtcagcc 
    5281 tacaactcct tgtagcaatt gttactgtaa aaaatgttgc tggcattgtc aactatgctt 
    5341 tctgaaaaaa ggcttaggca tctcccatgg caggaagaag cggaagcacc gacgaggaac 
    5401 tcctcgcagc agtaaggatc atcaaaatcc tgtaccaaag cagtgagtaa taagtatatg 
    5461 taatgacacc tttggaaatt agtgcaatag taggactgat agtagcgcta atcttagcaa 
    5521 tagtagtgtg gactatagta gctctagaat ataggaaaat actaaagcaa aggaaaatag 
    5581 ataggttact taagagaata agtgaaagag cagaagacag tggaaatgag agtgaagggg 
    5641 acacagatga attggccaaa cttgtggaac tgggggactt tgatccttgg gttggtgata 
    5701 atttgtagtg cctcaagcaa cttgtgggtt acagtttatt atggggttcc tgtgtggaga 
    5761 gatgcaaata ccaccctatt ttgtgcatca gatgccaaag cacatgagac agaggtgcac 
    5821 aatgtctggg ccacacatgc ctgtgtaccc acagacccca acccacaaga aatacccctg 
    5881 gaaaatgtaa cagaaaattt taacatgtgg aaaaataaca tggtagagca gatgcaggag 
    5941 gatgtaatca gtctatggga tcaaagtcta aagccatgtg taaagttaac tcctctctgt 
    6001 gttactttaa attgtaccga tgccaaatcg acccaggtca acataaccaa agaccctaaa 
    6061 acgggaaata taacattaaa aaatataaca gaggaagtaa aaaactgttc ttttaatatg 
    6121 accacagaaa tacacgatag gaagcagaag gtccatgcac ttttttataa gcttgatata 
    6181 gtaccaattg atagtaatag tagtaataga gatagtaggt atatgttaat aaactgtaat 
    6241 acttcagcca ttaagcaggc ttgtccaaag atatcctttg atccaattcc tatacattat 
    6301 tgtacaccag ctggttatgc gcttttaaag tgtaaagata agaatttcaa tgggacagga 
    6361 ccatgtaaaa atgtcagctc agtacaatgc acacatggaa ttaagccagt ggtctcaact 
    6421 caattgctgt taaatggcag tctagcagaa gaagagataa taatcagatc tgaaaatatc 
    6481 acagacaatg ccaaaaccat aatagtgcac cttaatgaac ctgtagaaat caattgtacc 
    6541 agaccctcca acaatacaag aacaagtacg aatataggac caggacgggt attctataga 
    6601 acaggagaaa taataggaga tataaggcaa gcatattgta aggttgacag aacaaattgg 
    6661 aataaaaatt tagaacaggt agctggaaaa ttaaaggagc actttaataa cacaataatc 
    6721 tttcaaccac catccccagg aggagatcta gaaataacaa tgcatcattt taattgtaga 
    6781 ggggaatttt tctattgcaa tacatcagaa ctgtttagta gtacttggta caaaaatgga 
    6841 accaacacca caaagtggga taatgacact atcatactta catgcaggat aaagcaaatt 
    6901 ataaacatgt ggcaggaagt tggacaagca atgtatgctc ctcccatcag tggagtaatt 
    6961 aattgtgtat caaatattac aggaatacta ttgacaagag ayggtggagg tcttaataat 
    7021 actaatgaga ctttcagacc tacaggagga aatataaagg acaattggag aagtgaatta 
    7081 tataaatata aagtagtaca aattgaacca ttaggaatag cacccaccag ggcaaagaga 
    7141 agagtggtgg agagagaaaa aagagcaata ggaataggag ctctgatctt tgggttctta 
    7201 ggagcagcag gaagcactat gggcgcggcg tcaataacgc tgacggtaca ggccagacaa 
    7261 ttattgtctg gtatagtgca acagcaaagc aatttgctga gggctataga ggcgcagcag 
    7321 catttgttgc aactcacagt ttggggcatt aaacagctcc aggcaagagt cctggctgtg 
    7381 gaaagatacc taaaggatca agagttccta ggactgtggg gctgctctgg aaaaatcatc 
    7441 tgcaccactg ctgtgccctg gaactccact tggagtaata gaacttatga cgagatttgg 
    7501 ggcaacatga catggataga atgggagaga gaaattagca attacacagg ccaaatatat 
    7561 gaaatactta cagaatcaca gaaccagcag aacaagaatg aaaaggattt gttggagttg 
    7621 gatcaatggg caagcctgtg gaattggttt agcataacaa agtggctgtg gtatataaaa 
    7681 atatttataa tgatagtagg aggtttaata ggtctaagaa taatttttgc tgtgctttct 
    7741 atagtaaata gagttaggca gggatactca cctttgtctt tccagacccc tacccatcat 
    7801 cagagggaac ccgacagacc cgaaagaatc gaagaagaag gtggcgagca aggcagagac 
    7861 agatccgtgc gattagtgag cggattctta gcacttgcgt gggacgatct acggagcctg 
    7921 tgcctcttca gctaccaccg cttgagagac ttcatcttgg ttgcagcgag gattgtggaa 
    7981 attctgggac acagcagtct caagggactg agacgggggt gggaaggcct caaatatctg 
    8041 gggaatcttc tggtatattg gggtcgggaa ctaagaatta gtgctatttc tttgcttgat 
    8101 actacagcaa tagcagtagc ggggtggaca gatagagtta tagaagtagt acaaagagct 
    8161 tggagagcct ttctccacat acctagaaga atcagacagg gcttagagag ggctttgcta 
    8221 taacatggga ggcaagtggt caaaaagtag catagtggga tggcctcagg tcagggaaag 
    8281 aataaggcaa actcctccag cagcagaagg agtaggagca gtatctcaag atctagataa 
    8341 acatggagca gtaacaagta gtaatatgaa taatgctgat tgtgtctggc tagaagcaca 
    8401 acaagaggaa gaggaggtag gctttccagt caggccacag gtacctctaa gaccaatgac 
    8461 ttttaaggga gcttttgatc ttagcttctt tttaaaagaa aaggggggac tggatgggct 
    8521 aatttactcc aagaaaagac aagagatcct tgatttatgg gtctaccata cgcaaggctt 
    8581 cttccctgat tggcacaact acacaccagg gccagggatc aggtatccac tgtgttttgg 
    8641 atggtgcttt aagctagtac cagttgaccc aaaagaagta gaggagaaca acaaagaaga 
    8701 aaacagctgc ctgttacacc ccatgagcca gcatggcata gatgacgaag acagagaagt 
    8761 gctgatgtgg aagtttgaca gtgccctagc acgaagacac atagcccgag aaatgcatcc 
    8821 agagttctat aaagactgct gacaacgaag tttctagcta gaacttccgc tggggacttt 
    8881 ccaggggagg tgtggccggg gcggagttgg ggagtggcta accctcagat gctgcataaa 
    8941 agcagccgct tctcgcttgt actgggtctc tcttgttgga ccagg
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Triad National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration
© Copyright Triad National Security, LLC. All Rights Reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health