View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS JX263455 465 bp DNA linear VRL 04-APR-2013
DEFINITION HIV-1 isolate YNHH09R125 from China envelope glycoprotein (env)
gene, partial cds
ACCESSION JX263455
VERSION JX263455.1 GI:428132490
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 465)
Show all sequences for reference 1
AUTHORS Chen,M., Yang,L., Ma,Y., Su,Y., Yang,C., Luo,H., Chen,H., Chen,L.,
Yan,W., Shi,Y., Jia,M. and Lu,L.
TITLE Emerging Variability in HIV-1 Genetics among Recently Infected
Individuals in Yunnan, China
JOURNAL PLoS ONE 8 (3), E60101 (2013)
PUBMED 23555898
REFERENCE 2 (bases 1 to 465)
Show all sequences for reference 2
AUTHORS Chen,M., Yang,L., Ma,Y., Yang,C., Su,Y., Luo,H., Chen,H., Chen,L.,
Yan,W., Shi,Y., Jia,M. and Lu,L.
TITLE Direct Submission
JOURNAL Submitted (30-JUN-2012) Center for AIDS/STD Control and Prevention,
Yunnan Center for Disease Control and Prevention, No 158, Dongsi
Street, Xishan District, Kunming, Yunnan 650022, China
COMMENT ##Assembly-Data-START## Assembly Method Sequencher v. 5.0
Sequencing Technology Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..465
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="YNHH09R125"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="China"
/collection_date="31-Mar-2009"
gene <1..>465
/gene="env"
CDS <1..>465
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AFY97428.1"
/db_xref="GI:428132491"
/translation="EIIIRSENLTNNAKTIIVHLNQSVEIVCTRPNNNTRKSIRIGPG
QTFYATGDIIGDIRQAHCNISEKQWRNTLHKVSEKLKEHFPNKTIKFNSSSGGDPEIT
THSFNCRGEFFYCNTSGLFNGTYNSTYNDTNTSNNTITIPCRIKQFINMWQEV"
BASE COUNT 205 a 79 c 76 g 105 t
ORIGIN
1 gagataataa ttagatctga aaatctgaca aacaatgcca aaacaataat agtacatctt
61 aatcaatctg tagagattgt atgtacaaga cccaacaata atacaagaaa aagtataagg
121 ataggaccag gacaaacatt ctatgcaaca ggagacatca taggagacat aagacaagca
181 cattgtaata ttagtgaaaa gcaatggagg aacactctac ataaagtaag tgagaaatta
241 aaagagcact tccctaataa aacaataaaa ttcaattcat cctcaggagg ggacccagaa
301 attacaacac atagctttaa ttgtagagga gaatttttct attgtaatac atcaggcctg
361 tttaatggga cctacaatag tacatacaat gatacaaaca catcaaacaa cacaatcaca
421 atcccatgca gaataaaaca gtttataaac atgtggcagg aggta
//
last modified: Tue May 31 10:56 2022