View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS JQ898200 1473 bp DNA linear VRL 07-NOV-2012
DEFINITION Human immunodeficiency virus isolate 1446 gag protein gene,
complete cds
ACCESSION JQ898200
VERSION JQ898200.1 GI:410585725
KEYWORDS .
SOURCE Human immunodeficiency virus
ORGANISM Human immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group; unclassified Primate lentivirus group
REFERENCE 1 (bases 1 to 1473)
Show all sequences for reference 1
AUTHORS Li,L., Chen,L., Yang,S., Li,T., Li,J., Liu,Y., Jia,L., Yang,B.,
Bao,Z., Li,H., Wang,X., Zhuang,D. and Liu,S.
TITLE Recombination Form and Epidemiology of HIV-1 Unique Recombinant
Strains Identified in Yunnan, China
JOURNAL PLoS ONE 7 (10), E46777 (2012)
PUBMED 23056447
REFERENCE 2 (bases 1 to 1473)
Show all sequences for reference 2
AUTHORS Li,L., Chen,L., Yang,S., Li,T., Li,J., Liu,Y., Yang,B., Bao,Z.,
Li,H., Wang,X., Zhuang,D. and Liu,S.
TITLE Direct Submission
JOURNAL Submitted (04-APR-2012) Department of AIDS Research, Beijing
Institute of Microbiology and Epidemiology, 20 Dongda Street,
Fengtai District, Beijing 100071, China
FEATURES Location/Qualifiers
source 1..1473
/organism="Human immunodeficiency virus"
/proviral="Human immunodeficiency virus"
/mol_type="genomic DNA"
/isolate="1446"
/host="Homo sapiens"
/db_xref="taxon:12721"
/country="China"
/collection_date="2009"
CDS 1..1473
/codon_start="1"
/transl_table="1"
/product="gag protein"
/protein_id="AFV74144.1"
/db_xref="GI:410585726"
/translation="MGARASVLSGGKLDAWEKIRLRPGGKKKYRMKHLVWASRELERF
ALNPGLLETAEGCQQIIEQLQSTIKTGSEELKSLFNTVVTLWCVHQRIEVKDTKEALD
KMEEVQKKSQQQTQQAAAGTGSSGKVSQNYPIVQNLQGQMVHQAISPRTLNAWVKVIE
EKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPV
HAGPVPPGQMREPRGSDIAGTTSTLQEQIAWMTGNPPVPVGDIYKRWIILGLNKIVRM
YSPVCILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTDTLLVQNANPDCKTIL
RGLGPGATLEEMMTACQGVGGPGHKARVLAEAMSQVQQTNVMMQRSNFKGPKRIVKCF
NCGKEGHIAKNCRAPRKKGCWKCGQEGHQMKDCTERQANFLGKFWPSHKGRPGNFPQS
RPEPTAPPAESFSFEEPSAPKQEPPLTSLKSLFGNDPLSQ"
BASE COUNT 534 a 282 c 364 g 291 t 2 other
ORIGIN
1 atgggtgcga gagcgtcagt attaagtggg ggaaaattag atgcatggga aaaaattcgg
61 ttacggccag ggggaaagaa aaaatatagg atgaaacatt tagtatgggc aagcagagag
121 ttagaaagat tcgcacttaa ccctggcctt ttagaaacag cagaaggatg tcagcaaata
181 atagaacagt tacagtcaac tatcaagaca ggatcagaag aacttaaatc attatttaat
241 acagtagtaa ccctctggtg tgtacatcaa aggatagagg taaaagacac caaggaagct
301 ttagataaaa tggaggaagt acaaaagaag agccagcaac agacacagca ggcagcagct
361 ggcacaggaa gtagcggcaa agtcagccag aattacccca tagtgcagaa cctccaaggg
421 caaatggtac accaggccat atcacctaga actttgaatg catgggtaaa agtaatagag
481 gaaaaggctt ttagcccaga ggtaataccc atgtttacag cattatcaga aggagccacc
541 ccacaagatt taaacaccat gttaaataca gtagggggac atcaagcagc catgcaaatg
601 ttaaaagata ccatcaatga agaggctgca gaatgggata gattacatcc agtacatgca
661 gggcctgtgc caccaggcca aatgagagaa ccaaggggaa gtgacatagc aggaactact
721 agyacccttc aggaacaaat agcatggatg acgggtaacc cacctgttcc agtgggagac
781 atytataaaa gatggataat tctgggatta aataaaatag taagaatgta tagccctgtt
841 tgcattttgg acataaaaca aggaccaaag gaacccttta gagactatgt agatcggttc
901 tttaaaactt taagagctga acaagctaca caagaggtaa aaaattggat gacagacacc
961 ttgttggtcc aaaatgcgaa cccagattgt aagaccattt taagagggtt aggaccaggg
1021 gctacattag aagaaatgat gacagcatgc cagggagtgg gaggacctgg tcataaagca
1081 agggttttgg ctgaggcaat gagccaagta caacagacaa atgtaatgat gcagagaagc
1141 aattttaaag gcccaaaaag aattgttaaa tgtttcaact gtggcaagga agggcacatc
1201 gccaaaaatt gcagggcccc taggaaaaaa ggctgttgga aatgtggaca ggaaggacat
1261 caaatgaaag actgtactga aaggcaggct aattttttag ggaaattttg gccttcccac
1321 aaggggaggc cagggaattt cccccagagc agaccggagc caacagcccc accagcagag
1381 agcttcagtt tcgaggagcc ctcagctcca aagcaggaac cacccttaac ttccctcaaa
1441 tcactctttg gcaacgaccc gttgtcacag taa
//
last modified: Tue May 31 10:56 2022