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LOCUS	    JQ898169		    1494 bp    DNA     linear	VRL 07-NOV-2012
DEFINITION  Human immunodeficiency virus isolate 518 gag protein gene, complete
	    cds
ACCESSION   JQ898169
VERSION     JQ898169.1 GI:410585663
KEYWORDS    .
SOURCE	    Human immunodeficiency virus
  ORGANISM  Human immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group; unclassified Primate lentivirus group
REFERENCE   1 (bases 1 to 1494)
            Show all sequences for reference 1
  AUTHORS   Li,L., Chen,L., Yang,S., Li,T., Li,J., Liu,Y., Jia,L., Yang,B.,
	    Bao,Z., Li,H., Wang,X., Zhuang,D. and Liu,S.
  TITLE     Recombination Form and Epidemiology of HIV-1 Unique Recombinant
	    Strains Identified in Yunnan, China
  JOURNAL   PLoS ONE 7 (10), E46777 (2012)
  PUBMED    23056447
REFERENCE   2 (bases 1 to 1494)
            Show all sequences for reference 2
  AUTHORS   Li,L., Chen,L., Yang,S., Li,T., Li,J., Liu,Y., Yang,B., Bao,Z.,
	    Li,H., Wang,X., Zhuang,D. and Liu,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-APR-2012) Department of AIDS Research, Beijing
	    Institute of Microbiology and Epidemiology, 20 Dongda Street,
	    Fengtai District, Beijing 100071, China
FEATURES             Location/Qualifiers
     source	     1..1494
		     /organism="Human immunodeficiency virus"
		     /proviral="Human immunodeficiency virus"
		     /mol_type="genomic DNA"
		     /isolate="518"
		     /host="Homo sapiens"
		     /db_xref="taxon:12721"
		     /country="China"
		     /collection_date="2009"
     CDS	     1..1494
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AFV74113.1"
		     /db_xref="GI:410585664"
		     /translation="MGARASILSGGKLDKWEKIRLRPGGKKKYRLKHLVWASRELERF
		     ALNPGLLETPEGCKQIIKQLQPALQTGTEEIKSLHNTVAVLYCVHTGIQVQDTKEALD
		     KIEEEQNKIQQKTQQAKKADEKVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKA
		     FSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVHAG
		     PPAPGQMREPRGSDIAGTTSTLQEQIGWMTSNPPIPVGEIYKRWIILGLNKIVRMYSP
		     TSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRAL
		     GPGATLEEMMTACQGVGGPSHKARVLAEAMSQTNSTIMMQRSNFKGSNRAVKCFNCGK
		     AGHIARNCKAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEP
		     TAPPEPTAPPAESFRFGETTPAPRQELKDREPLTSLRSLFGNDPLSQ"
BASE COUNT	559 a	 298 c	  354 g    282 t      1 other
ORIGIN
       1 atgggtgcga gagcgtcaat attaagcggg ggaaaattag ataaatggga aaaaattagg 
      61 ttaaggccag ggggaaagaa aaaatatagg ctaaaacacc tagtatgggc aagcagggag 
     121 ctggaaagat ttgcacttaa ccctggcctt ttagagacac cagaaggctg taagcaaata 
     181 ataaaacagc tacaaccagc tcttcagaca ggaacagagg aaattaaatc attacacaac 
     241 acagtagcag ttctctattg tgtacataca gggatacaag tacaagacac caaagaagct 
     301 ttagacaaga tagaggaaga acaaaataaa attcagcaaa aaacacagca ggcaaaaaag 
     361 gctgacgaga aggtcagtca aaattatcct atagtgcaga atctgcaagg gcaaatggta 
     421 catcagcccc tatcacctag aactttaaat gcatgggtaa aagtagtaga agagaaggct 
     481 tttagcccag aagtaatacc catgtttaca gcattatcag aaggagccac cccacaagat 
     541 ttaaatacta tgttaaatac agtaggggga catcaagcag ccatgcaaat gttaaaagat 
     601 accatcaatg aagaggctgc agaatgggat agattgcatc cagtgcatgc agggccaccg 
     661 gcaccaggtc agatgagaga accaagggga agtgacatag caggaactac tagtaccctt 
     721 caggagcaaa taggatggat gacaagtaat ccacctatcc cagtaggaga aatttataaa 
     781 agatggataa tcctgggatt aaataaaata gtaagaatgt atagccctac cagcattctg 
     841 gacataaaac aagggccaaa ggaacccttt agggactatg tagaccggtt ctttaaaact 
     901 ttaagagccg aacaagctac acaagatgta aaaaattgga tgacagacac cttgttagtc 
     961 caaaatgcga acccagattg taaaaccatt ttaagagcat taggaccagg ggctacatta 
    1021 gaagaaatga tgacagcatg tcagggagta ggaggaccta gccacaaagc aagagtgttg 
    1081 gctgaagcaa tgagccaaac aaacagtacc ataatgatgc agagaagcaa ttttaaaggc 
    1141 tctaacagag ctgttaaatg tttcaactgt ggcaaggcag ggcacatagc cagaaactgc 
    1201 aaggccccta ggaaaaaagg ctgttggaaa tgtggaaagg aaggacacca aatgaaggac 
    1261 tgtactgaaa gacaggctaa ttttttaggg aaaatttggc cttcccacaa ggggaggcca 
    1321 gggaatttcc tccagagcag accagagcca acagccccac cagagccaac agccccgcca 
    1381 gcagagagct tcaggttcgg ggagacaacc ccagctccga ggcaggarct gaaagacagg 
    1441 gaacctttaa cttccctcag atcactcttt ggcaacgacc ccttgtccca ataa
//
last modified: Tue May 31 10:56 2022


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