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LOCUS JQ898169 1494 bp DNA linear VRL 07-NOV-2012
DEFINITION Human immunodeficiency virus isolate 518 gag protein gene, complete
cds
ACCESSION JQ898169
VERSION JQ898169.1 GI:410585663
KEYWORDS .
SOURCE Human immunodeficiency virus
ORGANISM Human immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group; unclassified Primate lentivirus group
REFERENCE 1 (bases 1 to 1494)
Show all sequences for reference 1
AUTHORS Li,L., Chen,L., Yang,S., Li,T., Li,J., Liu,Y., Jia,L., Yang,B.,
Bao,Z., Li,H., Wang,X., Zhuang,D. and Liu,S.
TITLE Recombination Form and Epidemiology of HIV-1 Unique Recombinant
Strains Identified in Yunnan, China
JOURNAL PLoS ONE 7 (10), E46777 (2012)
PUBMED 23056447
REFERENCE 2 (bases 1 to 1494)
Show all sequences for reference 2
AUTHORS Li,L., Chen,L., Yang,S., Li,T., Li,J., Liu,Y., Yang,B., Bao,Z.,
Li,H., Wang,X., Zhuang,D. and Liu,S.
TITLE Direct Submission
JOURNAL Submitted (04-APR-2012) Department of AIDS Research, Beijing
Institute of Microbiology and Epidemiology, 20 Dongda Street,
Fengtai District, Beijing 100071, China
FEATURES Location/Qualifiers
source 1..1494
/organism="Human immunodeficiency virus"
/proviral="Human immunodeficiency virus"
/mol_type="genomic DNA"
/isolate="518"
/host="Homo sapiens"
/db_xref="taxon:12721"
/country="China"
/collection_date="2009"
CDS 1..1494
/codon_start="1"
/transl_table="1"
/product="gag protein"
/protein_id="AFV74113.1"
/db_xref="GI:410585664"
/translation="MGARASILSGGKLDKWEKIRLRPGGKKKYRLKHLVWASRELERF
ALNPGLLETPEGCKQIIKQLQPALQTGTEEIKSLHNTVAVLYCVHTGIQVQDTKEALD
KIEEEQNKIQQKTQQAKKADEKVSQNYPIVQNLQGQMVHQPLSPRTLNAWVKVVEEKA
FSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVHAG
PPAPGQMREPRGSDIAGTTSTLQEQIGWMTSNPPIPVGEIYKRWIILGLNKIVRMYSP
TSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRAL
GPGATLEEMMTACQGVGGPSHKARVLAEAMSQTNSTIMMQRSNFKGSNRAVKCFNCGK
AGHIARNCKAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEP
TAPPEPTAPPAESFRFGETTPAPRQELKDREPLTSLRSLFGNDPLSQ"
BASE COUNT 559 a 298 c 354 g 282 t 1 other
ORIGIN
1 atgggtgcga gagcgtcaat attaagcggg ggaaaattag ataaatggga aaaaattagg
61 ttaaggccag ggggaaagaa aaaatatagg ctaaaacacc tagtatgggc aagcagggag
121 ctggaaagat ttgcacttaa ccctggcctt ttagagacac cagaaggctg taagcaaata
181 ataaaacagc tacaaccagc tcttcagaca ggaacagagg aaattaaatc attacacaac
241 acagtagcag ttctctattg tgtacataca gggatacaag tacaagacac caaagaagct
301 ttagacaaga tagaggaaga acaaaataaa attcagcaaa aaacacagca ggcaaaaaag
361 gctgacgaga aggtcagtca aaattatcct atagtgcaga atctgcaagg gcaaatggta
421 catcagcccc tatcacctag aactttaaat gcatgggtaa aagtagtaga agagaaggct
481 tttagcccag aagtaatacc catgtttaca gcattatcag aaggagccac cccacaagat
541 ttaaatacta tgttaaatac agtaggggga catcaagcag ccatgcaaat gttaaaagat
601 accatcaatg aagaggctgc agaatgggat agattgcatc cagtgcatgc agggccaccg
661 gcaccaggtc agatgagaga accaagggga agtgacatag caggaactac tagtaccctt
721 caggagcaaa taggatggat gacaagtaat ccacctatcc cagtaggaga aatttataaa
781 agatggataa tcctgggatt aaataaaata gtaagaatgt atagccctac cagcattctg
841 gacataaaac aagggccaaa ggaacccttt agggactatg tagaccggtt ctttaaaact
901 ttaagagccg aacaagctac acaagatgta aaaaattgga tgacagacac cttgttagtc
961 caaaatgcga acccagattg taaaaccatt ttaagagcat taggaccagg ggctacatta
1021 gaagaaatga tgacagcatg tcagggagta ggaggaccta gccacaaagc aagagtgttg
1081 gctgaagcaa tgagccaaac aaacagtacc ataatgatgc agagaagcaa ttttaaaggc
1141 tctaacagag ctgttaaatg tttcaactgt ggcaaggcag ggcacatagc cagaaactgc
1201 aaggccccta ggaaaaaagg ctgttggaaa tgtggaaagg aaggacacca aatgaaggac
1261 tgtactgaaa gacaggctaa ttttttaggg aaaatttggc cttcccacaa ggggaggcca
1321 gggaatttcc tccagagcag accagagcca acagccccac cagagccaac agccccgcca
1381 gcagagagct tcaggttcgg ggagacaacc ccagctccga ggcaggarct gaaagacagg
1441 gaacctttaa cttccctcag atcactcttt ggcaacgacc ccttgtccca ataa
//
last modified: Tue May 31 10:56 2022