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LOCUS	    JQ864137		    2667 bp    DNA     linear	VRL 15-JUL-2012
DEFINITION  Simian immunodeficiency virus isolate H806-24w-10 envelope
	    glycoprotein (env) gene, complete cds
ACCESSION   JQ864137
VERSION     JQ864137.1 GI:392498978
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus (SIV)
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2667)
            Show all sequences for reference 1
  AUTHORS   Wu,F., Ourmanov,I., Kuwata,T., Goeken,R., Brown,C.R.,
	    Buckler-White,A., Iyengar,R., Plishka,R., Aoki,S.T. and Hirsch,V.M.
  TITLE     Sequential Evolution and Escape from Neutralization of Simian
	    Immunodeficiency Virus SIVsmE660 Clones in Rhesus Macaques.
  JOURNAL   J. Virol.. 86(16); 8835-47 (2012)
  PUBMED    22696650
REFERENCE   2 (bases 1 to 2667)
            Show all sequences for reference 2
  AUTHORS   Wu,F., Ourmanov,I., Kuwata,T., Goeken,R., Brown,C.R.,
	    Buckler-White,A., Iyengar,R., Plishka,R., Aoki,S.T. and Hirsch,V.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2012) Laboratory of Molecular Microbiology,
	    NIAID, NIH, 4 Center Drive, Room B1-33, Bethesda, MD 20892, USA
FEATURES             Location/Qualifiers
     source	     1..2667
		     /organism="Simian immunodeficiency virus"
		     /proviral="Simian immunodeficiency virus"
		     /mol_type="genomic DNA"
		     /isolate="H806-24w-10"
		     /host="Macaca mulatta (rhesus macaque)"
		     /db_xref="taxon:11723"
		     /country="USA"
		     /collection_date="24-Jan-2011"
     gene	     1..2667
		     /gene="env"
     CDS	     1..2667
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFM75774.1"
		     /db_xref="GI:392498979"
		     /translation="MGCLGNQLLIALLLVSALEIYCVQYVTVFYGVPAWKNATIPLFC
		     TTRNRDTWGTTQCLPDNDDYSELAINITEAFDAWNNTVTEQAIEDVWNLFETSIKPCV
		     KLTPLCIAMRCNKTETDRWGLTRNAGTTTTTTTTTTTTATPSVAEYVINESNPCIKNN
		     SCAGLEQEPMIGCKFNMTGLKRDKRIEYNETWYSRDLICEQSANESESKCYMHHCNTS
		     VIQESCDKHYWDAIRFRYCAPPGYALLRCNDSNYSGFAPNCSKVVVSSCTRMMETQTS
		     TWFGFNGTRAENRTYIYWHGKSNRTIISLNKYYNLTMRCRRPGNKTVLPVTIMSGLVF
		     HSQPINERPKQAWCWFGGSWKEAIQEVKETLVKHPRYTGTNDTKKINLTAPAGGDPEV
		     TFMWTNCRGEFLYCKMNWFLNWVEDRDQESSRWRQQNTREQQKKNYVPCHIRQIINTW
		     HKVGKNVYLPPREGDLTCNSTVTSLIAEIDWTNNNETNITMSAEVAELYRLELGDYKL
		     VEITPIGLAPTSVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTL
		     LAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNSWGCAFRQ
		     VCHTTVPWPNETLVPNWSNMTWQEWERQVDFLEANITQLLEEAQIQQEKNMYELQKLN
		     SWDIFGNWFDLTSWIRYIQYGVLIVLGVVGIRIVIYVVQMLARLRQGYRPVFSSPPAY
		     VQQIPTHKGQEPPTKEGEEGEGGDRGGNRSWPWQIEYTHFLIRQLTRLLTWLFSSCRD
		     WLLRTYQILQPVLQSLSTTSQRVREVIRIGIAYLQYGWRYFQEAVQAWWKFARETLAS
		     ASRDIWETLGRAGRGILAIPRRVRQGLELTLL"
BASE COUNT	874 a	 490 c	  650 g    653 t
ORIGIN
       1 atgggatgtc ttgggaatca gctgcttatc gcgctcttgc tagtaagtgc tttagagatt 
      61 tattgtgttc aatatgtaac agtattctat ggtgtaccag catggaagaa tgcgacaatt 
     121 cccctcttct gtacaaccag gaatagggac acttggggaa caacacaatg cttgccagat 
     181 aatgatgatt actcagaatt ggcaatcaat atcacagagg cttttgatgc ttggaataat 
     241 acagtcacag aacaagcaat agaggatgtg tggaacctct ttgaaacatc cattaagccc 
     301 tgtgtaaaac tcaccccact atgtatagca atgagatgta ataaaactga gacagatagg 
     361 tggggtttga caaggaacgc agggacaaca acaacaacaa caacaacaac aacaacaaca 
     421 gcaacaccaa gtgtggcaga atatgttata aatgaaagta atccttgcat aaaaaataat 
     481 agttgtgcag gcttggaaca ggagcccatg ataggttgta aatttaacat gacagggtta 
     541 aaaagggaca aaaggataga atataatgaa acatggtatt caagagattt aatctgtgag 
     601 cagtcagcaa atgaaagtga gagtaaatgt tacatgcatc attgtaacac cagtgttatt 
     661 caggaatcct gtgacaagca ttattgggat gctattagat ttagatattg tgcaccgcca 
     721 ggttatgctt tgcttaggtg taatgattca aattattcag gctttgctcc taactgttct 
     781 aaggtagtgg tttcttcatg cacaagaatg atggaaacgc aaacctctac ttggtttggc 
     841 ttcaatggta ctagggcaga aaatagaaca tacatttatt ggcatggcaa aagtaataga 
     901 accataatta gcttaaataa gtattataat ctaacaatga gatgtagaag accaggaaat 
     961 aagacagttt taccagtcac cattatgtca gggttggtct tccattcgca acccataaat 
    1021 gagagaccaa aacaggcctg gtgctggttt ggaggaagct ggaaagaggc catccaggaa 
    1081 gtgaaggaaa ccttggtcaa acatcccagg tatacgggaa ctaatgatac taagaaaatt 
    1141 aatctaacag ctccagcagg aggagatcca gaagtcactt ttatgtggac aaattgtaga 
    1201 ggagaattct tatactgcaa aatgaattgg tttcttaatt gggtagagga cagagaccaa 
    1261 gagagtagca gatggagaca acaaaatacg agagagcaac agaagaaaaa ttatgtgcca 
    1321 tgtcatatta gacaaataat caacacgtgg cacaaagtag gcaaaaatgt atatttgcct 
    1381 cctagggaag gagacctgac atgtaattcc actgtaacta gtctcatagc agagatagat 
    1441 tggaccaata acaatgagac caatatcacc atgagtgcag aggtggcaga actgtatcga 
    1501 ttggagttgg gagattacaa attagtagag attactccaa ttggcttggc ccccacaagt 
    1561 gtaagaaggt acaccacaac tggtgcctca agaaataaga gaggggtctt tgtgctaggg 
    1621 ttcttgggtt ttctcgcaac agcaggttct gcaatgggcg cggcgtcgct gacgctgtcg 
    1681 gctcagtccc ggactttgtt ggctgggata gtgcagcaac agcaacagct gttggatgtg 
    1741 gtcaagagac aacaagaatt gttgcgactg accgtctggg gaactaagaa cctccagact 
    1801 agagtcactg ctatcgagaa gtacctgaag gatcaggcgc agctaaattc atggggatgt 
    1861 gcttttaggc aagtctgtca cactactgta ccatggccaa atgaaacatt ggtgcctaat 
    1921 tggagcaata tgacttggca agagtgggaa agacaggttg acttcctaga ggcaaatata 
    1981 actcaattat tagaagaagc acaaattcag caagaaaaga atatgtatga attgcaaaaa 
    2041 ttaaatagct gggatatctt tggcaattgg tttgacctta cttcttggat aagatatata 
    2101 caatatggtg tactaatagt tttaggagta gtagggataa gaatagtaat atatgtagtg 
    2161 cagatgttag ctaggttaag acagggttat aggccagtgt tctcttcccc tcccgcttat 
    2221 gttcagcaga tccctaccca caagggccag gaaccgccaa ccaaagaagg agaagaagga 
    2281 gaaggtggag acagaggtgg caacagatct tggccttggc agatagaata tactcatttc 
    2341 ctgatccgcc aactgacacg cctcttgact tggctattca gcagctgcag ggattggcta 
    2401 ttgaggacct accagatcct ccaaccagta ctccagagcc tctcaacgac atcgcaaaga 
    2461 gtccgtgaag tcatcagaat tggaatagcc tacctacaat atgggtggcg ttatttccaa 
    2521 gaagcagtgc aggcgtggtg gaaatttgcg cgagagactc ttgcaagcgc gtcgagagac 
    2581 atatgggaga ctctgggaag ggctggaaga gggatactcg caatccctag gcgcgtcagg 
    2641 caagggcttg agctcactct cttgtga
//
last modified: Tue May 31 10:56 2022


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