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LOCUS JQ864137 2667 bp DNA linear VRL 15-JUL-2012
DEFINITION Simian immunodeficiency virus isolate H806-24w-10 envelope
glycoprotein (env) gene, complete cds
ACCESSION JQ864137
VERSION JQ864137.1 GI:392498978
KEYWORDS .
SOURCE Simian immunodeficiency virus (SIV)
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2667)
Show all sequences for reference 1
AUTHORS Wu,F., Ourmanov,I., Kuwata,T., Goeken,R., Brown,C.R.,
Buckler-White,A., Iyengar,R., Plishka,R., Aoki,S.T. and Hirsch,V.M.
TITLE Sequential Evolution and Escape from Neutralization of Simian
Immunodeficiency Virus SIVsmE660 Clones in Rhesus Macaques.
JOURNAL J. Virol.. 86(16); 8835-47 (2012)
PUBMED 22696650
REFERENCE 2 (bases 1 to 2667)
Show all sequences for reference 2
AUTHORS Wu,F., Ourmanov,I., Kuwata,T., Goeken,R., Brown,C.R.,
Buckler-White,A., Iyengar,R., Plishka,R., Aoki,S.T. and Hirsch,V.M.
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2012) Laboratory of Molecular Microbiology,
NIAID, NIH, 4 Center Drive, Room B1-33, Bethesda, MD 20892, USA
FEATURES Location/Qualifiers
source 1..2667
/organism="Simian immunodeficiency virus"
/proviral="Simian immunodeficiency virus"
/mol_type="genomic DNA"
/isolate="H806-24w-10"
/host="Macaca mulatta (rhesus macaque)"
/db_xref="taxon:11723"
/country="USA"
/collection_date="24-Jan-2011"
gene 1..2667
/gene="env"
CDS 1..2667
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AFM75774.1"
/db_xref="GI:392498979"
/translation="MGCLGNQLLIALLLVSALEIYCVQYVTVFYGVPAWKNATIPLFC
TTRNRDTWGTTQCLPDNDDYSELAINITEAFDAWNNTVTEQAIEDVWNLFETSIKPCV
KLTPLCIAMRCNKTETDRWGLTRNAGTTTTTTTTTTTTATPSVAEYVINESNPCIKNN
SCAGLEQEPMIGCKFNMTGLKRDKRIEYNETWYSRDLICEQSANESESKCYMHHCNTS
VIQESCDKHYWDAIRFRYCAPPGYALLRCNDSNYSGFAPNCSKVVVSSCTRMMETQTS
TWFGFNGTRAENRTYIYWHGKSNRTIISLNKYYNLTMRCRRPGNKTVLPVTIMSGLVF
HSQPINERPKQAWCWFGGSWKEAIQEVKETLVKHPRYTGTNDTKKINLTAPAGGDPEV
TFMWTNCRGEFLYCKMNWFLNWVEDRDQESSRWRQQNTREQQKKNYVPCHIRQIINTW
HKVGKNVYLPPREGDLTCNSTVTSLIAEIDWTNNNETNITMSAEVAELYRLELGDYKL
VEITPIGLAPTSVRRYTTTGASRNKRGVFVLGFLGFLATAGSAMGAASLTLSAQSRTL
LAGIVQQQQQLLDVVKRQQELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNSWGCAFRQ
VCHTTVPWPNETLVPNWSNMTWQEWERQVDFLEANITQLLEEAQIQQEKNMYELQKLN
SWDIFGNWFDLTSWIRYIQYGVLIVLGVVGIRIVIYVVQMLARLRQGYRPVFSSPPAY
VQQIPTHKGQEPPTKEGEEGEGGDRGGNRSWPWQIEYTHFLIRQLTRLLTWLFSSCRD
WLLRTYQILQPVLQSLSTTSQRVREVIRIGIAYLQYGWRYFQEAVQAWWKFARETLAS
ASRDIWETLGRAGRGILAIPRRVRQGLELTLL"
BASE COUNT 874 a 490 c 650 g 653 t
ORIGIN
1 atgggatgtc ttgggaatca gctgcttatc gcgctcttgc tagtaagtgc tttagagatt
61 tattgtgttc aatatgtaac agtattctat ggtgtaccag catggaagaa tgcgacaatt
121 cccctcttct gtacaaccag gaatagggac acttggggaa caacacaatg cttgccagat
181 aatgatgatt actcagaatt ggcaatcaat atcacagagg cttttgatgc ttggaataat
241 acagtcacag aacaagcaat agaggatgtg tggaacctct ttgaaacatc cattaagccc
301 tgtgtaaaac tcaccccact atgtatagca atgagatgta ataaaactga gacagatagg
361 tggggtttga caaggaacgc agggacaaca acaacaacaa caacaacaac aacaacaaca
421 gcaacaccaa gtgtggcaga atatgttata aatgaaagta atccttgcat aaaaaataat
481 agttgtgcag gcttggaaca ggagcccatg ataggttgta aatttaacat gacagggtta
541 aaaagggaca aaaggataga atataatgaa acatggtatt caagagattt aatctgtgag
601 cagtcagcaa atgaaagtga gagtaaatgt tacatgcatc attgtaacac cagtgttatt
661 caggaatcct gtgacaagca ttattgggat gctattagat ttagatattg tgcaccgcca
721 ggttatgctt tgcttaggtg taatgattca aattattcag gctttgctcc taactgttct
781 aaggtagtgg tttcttcatg cacaagaatg atggaaacgc aaacctctac ttggtttggc
841 ttcaatggta ctagggcaga aaatagaaca tacatttatt ggcatggcaa aagtaataga
901 accataatta gcttaaataa gtattataat ctaacaatga gatgtagaag accaggaaat
961 aagacagttt taccagtcac cattatgtca gggttggtct tccattcgca acccataaat
1021 gagagaccaa aacaggcctg gtgctggttt ggaggaagct ggaaagaggc catccaggaa
1081 gtgaaggaaa ccttggtcaa acatcccagg tatacgggaa ctaatgatac taagaaaatt
1141 aatctaacag ctccagcagg aggagatcca gaagtcactt ttatgtggac aaattgtaga
1201 ggagaattct tatactgcaa aatgaattgg tttcttaatt gggtagagga cagagaccaa
1261 gagagtagca gatggagaca acaaaatacg agagagcaac agaagaaaaa ttatgtgcca
1321 tgtcatatta gacaaataat caacacgtgg cacaaagtag gcaaaaatgt atatttgcct
1381 cctagggaag gagacctgac atgtaattcc actgtaacta gtctcatagc agagatagat
1441 tggaccaata acaatgagac caatatcacc atgagtgcag aggtggcaga actgtatcga
1501 ttggagttgg gagattacaa attagtagag attactccaa ttggcttggc ccccacaagt
1561 gtaagaaggt acaccacaac tggtgcctca agaaataaga gaggggtctt tgtgctaggg
1621 ttcttgggtt ttctcgcaac agcaggttct gcaatgggcg cggcgtcgct gacgctgtcg
1681 gctcagtccc ggactttgtt ggctgggata gtgcagcaac agcaacagct gttggatgtg
1741 gtcaagagac aacaagaatt gttgcgactg accgtctggg gaactaagaa cctccagact
1801 agagtcactg ctatcgagaa gtacctgaag gatcaggcgc agctaaattc atggggatgt
1861 gcttttaggc aagtctgtca cactactgta ccatggccaa atgaaacatt ggtgcctaat
1921 tggagcaata tgacttggca agagtgggaa agacaggttg acttcctaga ggcaaatata
1981 actcaattat tagaagaagc acaaattcag caagaaaaga atatgtatga attgcaaaaa
2041 ttaaatagct gggatatctt tggcaattgg tttgacctta cttcttggat aagatatata
2101 caatatggtg tactaatagt tttaggagta gtagggataa gaatagtaat atatgtagtg
2161 cagatgttag ctaggttaag acagggttat aggccagtgt tctcttcccc tcccgcttat
2221 gttcagcaga tccctaccca caagggccag gaaccgccaa ccaaagaagg agaagaagga
2281 gaaggtggag acagaggtgg caacagatct tggccttggc agatagaata tactcatttc
2341 ctgatccgcc aactgacacg cctcttgact tggctattca gcagctgcag ggattggcta
2401 ttgaggacct accagatcct ccaaccagta ctccagagcc tctcaacgac atcgcaaaga
2461 gtccgtgaag tcatcagaat tggaatagcc tacctacaat atgggtggcg ttatttccaa
2521 gaagcagtgc aggcgtggtg gaaatttgcg cgagagactc ttgcaagcgc gtcgagagac
2581 atatgggaga ctctgggaag ggctggaaga gggatactcg caatccctag gcgcgtcagg
2641 caagggcttg agctcactct cttgtga
//
last modified: Tue May 31 10:56 2022