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LOCUS JQ609758 2646 bp DNA linear VRL 25-MAR-2012
DEFINITION HIV-1 isolate 45_01E1 from USA envelope glycoprotein (env) gene,
complete cds
ACCESSION JQ609758
VERSION JQ609758.1 GI:380718252
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2646)
Show all sequences for reference 1
AUTHORS Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B.F., Yang,Z., Imamichi,H.,
Doria-Rose,N., Hoxie,J.A., Connors,M., Shaw,G.M., Wyatt,R.T. and
Mascola,J.R.
TITLE Selection Pressure on HIV-1 Envelope by Broadly Neutralizing
Antibodies to the Conserved CD4-Binding Site.
JOURNAL J. Virol.. 86(10); 5844-56 (2012)
PUBMED 22419808
REFERENCE 2 (bases 1 to 2646)
Show all sequences for reference 2
AUTHORS Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B., Yang,Z., Imamichi,H.,
Doria-Rose,N., Hoxie,J., Connors,M., Shaw,G., Wyatt,R. and
Mascola,J.
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2012) VRC / NIAID, NIH, 40 Convent Drive,
Bethesda, MD 20910, USA
FEATURES Location/Qualifiers
source 1..2646
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="45_01E1"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="USA"
/collection_date="08-Feb-2001"
/note="subtype: B"
gene 1..2646
/gene="env"
CDS 1..2646
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AFE02324.1"
/db_xref="GI:380718253"
/translation="MRVMGIRKNCQRLWKGGIWFLGILMICSAEDLWVTVYYGVPVWK
EASTTLFCASDAKAYKTEKHNVWATHACVPTDPNPQEVVLENVTEKFNMWKNNMVEQM
HEDIISLWDQSLKPCVKLTPLCVTLNCTDYEGNKATGNTTKATSNTAGTTSAATSTPS
SASTTTNGSGGAMEEREIKNCTFNITTGMRDKVQKEYALLYKFDIEPIKDDSDKTNTT
NTNYRLISCNTSVITQACPKISFEPIPIHYCAPAGFAILKCNDKKFNGTGKCTNVSTV
QCTHGIRPVVSTQLLLNGSLAEEEIIIRSENLTKNQKTIIVQLNETVAINCTRPNNNT
RRSIPMGPGKAFFTTGQVIGNIRQAHCNISKTDWNNTLRQVAKKLKELFNKTIIFNQS
TGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWHGNETEDTKDNKTITLPCRIRQIVNRW
QEVGKAMYAPPIEGLIRCSSNITGLLLTRDGGNITNENTTETFRPGGGDMRDNWRSEL
YKYKVVKIEPLGVAPTRAKRRVVQREKRAAGIGALFLGFLGAAGSTMGAASLTLTVQA
RLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCS
GKLICTTTVPWNGSWSNKTYEAIWDNMTWMDWEREIENYTGVIYGLIEQSQNQQEKNE
QELLALDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIIFTVLSIVNRVRQGYSPL
SFQTHLPAPRGPDRPDGIEEEGGEQDRDRSGRLVTGFLAIFWVDLRSLCLFSYHRLRD
LLLIVTRIVELLGRRGWEILKYWWNLLQYWSQELKNSAVSLLNATAIVVAEGTDRVIE
ILQRAFRAILNIPTRIRQGLERALL"
BASE COUNT 927 a 456 c 625 g 638 t
ORIGIN
1 atgagagtga tggggatcag gaagaattgt cagcgcttgt ggaaaggggg catctggttc
61 ctggggatat tgatgatctg tagtgcagaa gatttgtggg tcacagttta ttatggggta
121 cctgtgtgga aagaagcaag caccactcta ttttgtgcat cagatgctaa agcatataag
181 acagagaaac ataatgtttg ggccacacat gcctgcgtac ccacagaccc caacccacaa
241 gaagtagtat tggaaaatgt gacagaaaag tttaacatgt ggaaaaataa catggtagaa
301 cagatgcatg aggatataat cagtttatgg gatcaaagct taaagccatg tgtaaaatta
361 acccccctct gtgttacttt aaattgcact gattatgagg gaaataaggc cactggtaat
421 accactaagg ccaccagtaa taccgctggt accactagtg ctgccactag tacccctagt
481 agtgcctcta cgaccactaa tggtagcggg ggagcgatgg aagaaagaga aataaaaaac
541 tgcactttta atatcaccac aggcatgaga gataaggtac agaaagaata tgcattattg
601 tataagtttg atatagaacc aataaaggat gatagtgata agactaatac tactaatacc
661 aactataggt tgataagttg taacacctca gtcattacac aggcctgtcc aaagatatcc
721 tttgagccaa ttcccataca ttattgtgcc ccagctggtt ttgcgattct aaagtgtaat
781 gataaaaagt tcaatggaac aggaaaatgt acaaatgtca gcacagtaca atgcacacat
841 ggaattaggc cagtagtatc aactcagctg ctgttaaatg gcagtctagc agaagaagag
901 ataataataa gatctgaaaa tctcacgaaa aatcagaaaa ccataatagt acagctgaat
961 gaaactgtag caattaattg tacaagaccc aacaacaata caagaagaag tatacctatg
1021 ggaccaggga aagcattctt tacaacagga caagtaatag gaaatataag acaagcacat
1081 tgtaacatta gtaaaacaga ttggaataac actttaagac aggtagcaaa aaaattaaaa
1141 gaactcttta ataaaacaat aatctttaac caatccacag gaggggatcc agaaattgta
1201 atgcacagtt ttaattgtgg aggggaattt ttctactgta atacaacaca actgtttaat
1261 agcacttggc atgggaatga gactgaagac actaaagata ataaaacaat tacactccca
1321 tgcagaataa gacaaattgt aaacagatgg caggaagtag gaaaagcaat gtatgcccct
1381 cccatcgaag gactaattag atgttcatca aatattactg ggctgctatt aacaagagat
1441 ggtggtaata tcacgaacga gaatactact gagaccttca gacctggagg aggagatatg
1501 agggacaatt ggagaagtga attatataaa tataaagtag taaaaattga accattagga
1561 gtagcaccca ccagggcaaa gagaagagtg gtgcagagag aaaaaagagc agcgggaata
1621 ggagctttgt tccttgggtt cttgggagca gcaggaagca ctatgggcgc agcgtcactg
1681 acgctgacgg tacaggccag actattattg tctggtatag tgcaacagca gaataatttg
1741 ctgagagcta ttgaggcgca acagcatctg ttgcaactca cagtctgggg catcaagcag
1801 ctccaagcaa gagtcctggc tgtggaaaga tacctaaggg atcaacagct cctggggatt
1861 tggggttgct ctggaaaact catttgcacc actactgtgc cttggaatgg gagttggagt
1921 aataaaactt atgaggcaat ttgggataac atgacctgga tggattggga aagagaaatt
1981 gaaaattaca caggcgtaat atatggctta attgaacaat cgcaaaacca gcaagaaaag
2041 aatgaacaag aattattggc attagataaa tgggcaagtt tgtggaattg gtttgacata
2101 acaaaatggc tgtggtacat aaaaatattt ataatgatag taggaggctt aataggttta
2161 agaataattt ttactgtact ttctatagtg aatagagtta ggcagggata ctcaccatta
2221 tcgtttcaga cccacctccc agccccgagg ggacccgaca ggcccgacgg aatcgaagaa
2281 gaaggtggag agcaagacag agacagatcc ggtcgtttag taactggatt cttagcaatt
2341 ttctgggtcg acctgcggag cctgtgcctc ttcagctacc accgcttgag agacttactc
2401 ttgattgtga cgaggattgt ggaacttctg ggacgcaggg ggtgggaaat cctcaaatat
2461 tggtggaatc tcctgcagta ttggagtcag gaactaaaga atagtgctgt tagcttgctt
2521 aatgccacag ccatagtagt agctgaaggg acagataggg ttatagaaat attacaaaga
2581 gcttttagag ctattctcaa catacctact agaataagac agggcttgga aagggctttg
2641 ctataa
//
last modified: Tue May 31 10:56 2022