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LOCUS	    JQ609758		    2646 bp    DNA     linear	VRL 25-MAR-2012
DEFINITION  HIV-1 isolate 45_01E1 from USA envelope glycoprotein (env) gene,
	    complete cds
ACCESSION   JQ609758
VERSION     JQ609758.1 GI:380718252
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2646)
            Show all sequences for reference 1
  AUTHORS   Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B.F., Yang,Z., Imamichi,H.,
	    Doria-Rose,N., Hoxie,J.A., Connors,M., Shaw,G.M., Wyatt,R.T. and
	    Mascola,J.R.
  TITLE     Selection Pressure on HIV-1 Envelope by Broadly Neutralizing
	    Antibodies to the Conserved CD4-Binding Site.
  JOURNAL   J. Virol.. 86(10); 5844-56 (2012)
  PUBMED    22419808
REFERENCE   2 (bases 1 to 2646)
            Show all sequences for reference 2
  AUTHORS   Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B., Yang,Z., Imamichi,H.,
	    Doria-Rose,N., Hoxie,J., Connors,M., Shaw,G., Wyatt,R. and
	    Mascola,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-FEB-2012) VRC / NIAID, NIH, 40 Convent Drive,
	    Bethesda, MD 20910, USA
FEATURES             Location/Qualifiers
     source	     1..2646
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="45_01E1"
		     /isolation_source="plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="08-Feb-2001"
		     /note="subtype: B"
     gene	     1..2646
		     /gene="env"
     CDS	     1..2646
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFE02324.1"
		     /db_xref="GI:380718253"
		     /translation="MRVMGIRKNCQRLWKGGIWFLGILMICSAEDLWVTVYYGVPVWK
		     EASTTLFCASDAKAYKTEKHNVWATHACVPTDPNPQEVVLENVTEKFNMWKNNMVEQM
		     HEDIISLWDQSLKPCVKLTPLCVTLNCTDYEGNKATGNTTKATSNTAGTTSAATSTPS
		     SASTTTNGSGGAMEEREIKNCTFNITTGMRDKVQKEYALLYKFDIEPIKDDSDKTNTT
		     NTNYRLISCNTSVITQACPKISFEPIPIHYCAPAGFAILKCNDKKFNGTGKCTNVSTV
		     QCTHGIRPVVSTQLLLNGSLAEEEIIIRSENLTKNQKTIIVQLNETVAINCTRPNNNT
		     RRSIPMGPGKAFFTTGQVIGNIRQAHCNISKTDWNNTLRQVAKKLKELFNKTIIFNQS
		     TGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWHGNETEDTKDNKTITLPCRIRQIVNRW
		     QEVGKAMYAPPIEGLIRCSSNITGLLLTRDGGNITNENTTETFRPGGGDMRDNWRSEL
		     YKYKVVKIEPLGVAPTRAKRRVVQREKRAAGIGALFLGFLGAAGSTMGAASLTLTVQA
		     RLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCS
		     GKLICTTTVPWNGSWSNKTYEAIWDNMTWMDWEREIENYTGVIYGLIEQSQNQQEKNE
		     QELLALDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIIFTVLSIVNRVRQGYSPL
		     SFQTHLPAPRGPDRPDGIEEEGGEQDRDRSGRLVTGFLAIFWVDLRSLCLFSYHRLRD
		     LLLIVTRIVELLGRRGWEILKYWWNLLQYWSQELKNSAVSLLNATAIVVAEGTDRVIE
		     ILQRAFRAILNIPTRIRQGLERALL"
BASE COUNT	927 a	 456 c	  625 g    638 t
ORIGIN
       1 atgagagtga tggggatcag gaagaattgt cagcgcttgt ggaaaggggg catctggttc 
      61 ctggggatat tgatgatctg tagtgcagaa gatttgtggg tcacagttta ttatggggta 
     121 cctgtgtgga aagaagcaag caccactcta ttttgtgcat cagatgctaa agcatataag 
     181 acagagaaac ataatgtttg ggccacacat gcctgcgtac ccacagaccc caacccacaa 
     241 gaagtagtat tggaaaatgt gacagaaaag tttaacatgt ggaaaaataa catggtagaa 
     301 cagatgcatg aggatataat cagtttatgg gatcaaagct taaagccatg tgtaaaatta 
     361 acccccctct gtgttacttt aaattgcact gattatgagg gaaataaggc cactggtaat 
     421 accactaagg ccaccagtaa taccgctggt accactagtg ctgccactag tacccctagt 
     481 agtgcctcta cgaccactaa tggtagcggg ggagcgatgg aagaaagaga aataaaaaac 
     541 tgcactttta atatcaccac aggcatgaga gataaggtac agaaagaata tgcattattg 
     601 tataagtttg atatagaacc aataaaggat gatagtgata agactaatac tactaatacc 
     661 aactataggt tgataagttg taacacctca gtcattacac aggcctgtcc aaagatatcc 
     721 tttgagccaa ttcccataca ttattgtgcc ccagctggtt ttgcgattct aaagtgtaat 
     781 gataaaaagt tcaatggaac aggaaaatgt acaaatgtca gcacagtaca atgcacacat 
     841 ggaattaggc cagtagtatc aactcagctg ctgttaaatg gcagtctagc agaagaagag 
     901 ataataataa gatctgaaaa tctcacgaaa aatcagaaaa ccataatagt acagctgaat 
     961 gaaactgtag caattaattg tacaagaccc aacaacaata caagaagaag tatacctatg 
    1021 ggaccaggga aagcattctt tacaacagga caagtaatag gaaatataag acaagcacat 
    1081 tgtaacatta gtaaaacaga ttggaataac actttaagac aggtagcaaa aaaattaaaa 
    1141 gaactcttta ataaaacaat aatctttaac caatccacag gaggggatcc agaaattgta 
    1201 atgcacagtt ttaattgtgg aggggaattt ttctactgta atacaacaca actgtttaat 
    1261 agcacttggc atgggaatga gactgaagac actaaagata ataaaacaat tacactccca 
    1321 tgcagaataa gacaaattgt aaacagatgg caggaagtag gaaaagcaat gtatgcccct 
    1381 cccatcgaag gactaattag atgttcatca aatattactg ggctgctatt aacaagagat 
    1441 ggtggtaata tcacgaacga gaatactact gagaccttca gacctggagg aggagatatg 
    1501 agggacaatt ggagaagtga attatataaa tataaagtag taaaaattga accattagga 
    1561 gtagcaccca ccagggcaaa gagaagagtg gtgcagagag aaaaaagagc agcgggaata 
    1621 ggagctttgt tccttgggtt cttgggagca gcaggaagca ctatgggcgc agcgtcactg 
    1681 acgctgacgg tacaggccag actattattg tctggtatag tgcaacagca gaataatttg 
    1741 ctgagagcta ttgaggcgca acagcatctg ttgcaactca cagtctgggg catcaagcag 
    1801 ctccaagcaa gagtcctggc tgtggaaaga tacctaaggg atcaacagct cctggggatt 
    1861 tggggttgct ctggaaaact catttgcacc actactgtgc cttggaatgg gagttggagt 
    1921 aataaaactt atgaggcaat ttgggataac atgacctgga tggattggga aagagaaatt 
    1981 gaaaattaca caggcgtaat atatggctta attgaacaat cgcaaaacca gcaagaaaag 
    2041 aatgaacaag aattattggc attagataaa tgggcaagtt tgtggaattg gtttgacata 
    2101 acaaaatggc tgtggtacat aaaaatattt ataatgatag taggaggctt aataggttta 
    2161 agaataattt ttactgtact ttctatagtg aatagagtta ggcagggata ctcaccatta 
    2221 tcgtttcaga cccacctccc agccccgagg ggacccgaca ggcccgacgg aatcgaagaa 
    2281 gaaggtggag agcaagacag agacagatcc ggtcgtttag taactggatt cttagcaatt 
    2341 ttctgggtcg acctgcggag cctgtgcctc ttcagctacc accgcttgag agacttactc 
    2401 ttgattgtga cgaggattgt ggaacttctg ggacgcaggg ggtgggaaat cctcaaatat 
    2461 tggtggaatc tcctgcagta ttggagtcag gaactaaaga atagtgctgt tagcttgctt 
    2521 aatgccacag ccatagtagt agctgaaggg acagataggg ttatagaaat attacaaaga 
    2581 gcttttagag ctattctcaa catacctact agaataagac agggcttgga aagggctttg 
    2641 ctataa
//
last modified: Tue May 31 10:56 2022


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