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LOCUS	    JQ609754		    2616 bp    DNA     linear	VRL 25-MAR-2012
DEFINITION  HIV-1 isolate 45_01D17 from USA envelope glycoprotein (env) gene,
	    complete cds
ACCESSION   JQ609754
VERSION     JQ609754.1 GI:380718244
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2616)
            Show all sequences for reference 1
  AUTHORS   Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B.F., Yang,Z., Imamichi,H.,
	    Doria-Rose,N., Hoxie,J.A., Connors,M., Shaw,G.M., Wyatt,R.T. and
	    Mascola,J.R.
  TITLE     Selection Pressure on HIV-1 Envelope by Broadly Neutralizing
	    Antibodies to the Conserved CD4-Binding Site.
  JOURNAL   J. Virol.. 86(10); 5844-56 (2012)
  PUBMED    22419808
REFERENCE   2 (bases 1 to 2616)
            Show all sequences for reference 2
  AUTHORS   Wu,X., Wang,C., O'Dell,S., Li,Y., Keele,B., Yang,Z., Imamichi,H.,
	    Doria-Rose,N., Hoxie,J., Connors,M., Shaw,G., Wyatt,R. and
	    Mascola,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-FEB-2012) VRC / NIAID, NIH, 40 Convent Drive,
	    Bethesda, MD 20910, USA
FEATURES             Location/Qualifiers
     source	     1..2616
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="45_01D17"
		     /isolation_source="plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="08-Feb-2001"
		     /note="subtype: B"
     gene	     1..2616
		     /gene="env"
     CDS	     1..2616
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFE02320.1"
		     /db_xref="GI:380718245"
		     /translation="MRVMGIRKNCQRLWKGGTWFLGILMICSAAEQLWVTVYYGVPVW
		     KEANTTLFCASDAKAYSTERHNVWATHACVPTDPNPQEVVLENVTEKFNMWENNMVEQ
		     MHEDIISLWDQSLQPCVKLTPLCVTLNCIDYVENTNKATNGTSTATPSPTTTTTNSSG
		     GAREEREIKNCTFNITTGMRDKVQKEYALLYKFDIEPIKDDSDKTNTTNTNYRLISCN
		     TSVITQACPKISFEPIPIHYCAPAGFAILKCNDKKFNGTGKCANVSTVQCTHGIRPVV
		     STQLLLNGSLAEEEIIIRSRNLSENDDIIIVQLSKTVLINCTRPNNNTRRSIPMGPGK
		     AFFTTGQVIGNIRQAHCNISKTDWNNTLRQVAIKLRKLFNKTIVFNQSTGGDPEIVMH
		     SFNCGGEFFYCNTTQLFNSTWHGNETEDTKDNKTITLPCRIKQIVNRWQEVGKAMYAP
		     PIEGLIRCSSNITGLLLTRDGGNITNENTTETFRPGGGNMRDNWRSELYKYKVVKIEP
		     LGVAPTKAKRRVVQREKRAAGIGALFLGFLGAAGSTMGAASLTLTVQARLLLSGIVQQ
		     QNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTTVP
		     WNGSWSNKTYDAIWDNMTWMDWEREIENYTGVIYDLIEQSQNQQEKNEQELLALDKWA
		     SLWNWFDITKWLWYIKIFIMIVGGLIGLRIIFTVLSIVNRVRQGYSPLSFQTHLPAPR
		     GPDRPDGIEEEGGEQDRDRSGRLATGFLAIVWVDLRSLCLFSYHRLRDLLLIVTRIVE
		     LLGRRGWEILKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRVIEIFQRAFRAIL
		     NIPTRIRQGLERALL"
BASE COUNT	917 a	 453 c	  610 g    636 t
ORIGIN
       1 atgagagtga tggggatcag gaagaactgt cagcgcttgt ggaaaggggg cacttggttc 
      61 ctagggatat tgatgatctg tagtgctgca gaacaattgt gggtcacagt ctattatggg 
     121 gtacctgtgt ggaaagaagc aaacaccact ctattttgtg catcagatgc taaagcatat 
     181 agtacagaga gacataatgt ttgggccaca catgcctgcg tacccacaga ccccaaccca 
     241 caagaagtag tattggaaaa tgtgacagaa aagtttaaca tgtgggaaaa caacatggta 
     301 gaacagatgc atgaggatat aatcagttta tgggatcaaa gcctacagcc atgtgtaaaa 
     361 ttaacccccc tctgtgttac tttaaattgc attgattatg tggagaatac taataaggcc 
     421 actaatggta cttctaccgc tacccctagt cctaccacta cgaccactaa tagtagcggg 
     481 ggagcgaggg aagaaagaga aataaaaaac tgcactttta atatcaccac aggcatgaga 
     541 gataaggtac agaaagaata tgcattattg tataagtttg atatagaacc aataaaggat 
     601 gatagtgata agactaatac tactaatacc aactataggt tgataagttg taacacctca 
     661 gtcattacac aggcctgtcc aaagatatcc tttgagccaa ttcccataca ttattgtgcc 
     721 ccggctggtt ttgcgattct aaagtgtaat gataaaaagt tcaatggaac aggaaaatgt 
     781 gcaaatgtca gtacagtaca atgcacacat ggaattaggc cagtagtatc aactcaactg 
     841 ctgttaaatg gcagtctagc agaagaagag ataataataa gatctagaaa tctctcggaa 
     901 aatgatgaca tcataatagt acagctgagt aaaactgtat taattaattg tacaagaccc 
     961 aacaacaata caagaagaag tatacctatg ggaccaggga aagcattttt tacaacagga 
    1021 caagtaatag gaaatataag acaagcacat tgtaacatta gtaaaacaga ttggaataac 
    1081 actttaagac aggtagcaat aaaattaaga aaactcttta ataaaacaat agtctttaac 
    1141 caatccacag gaggggaccc agaaattgta atgcacagtt ttaattgtgg aggggaattt 
    1201 ttctactgta atacaacaca actgtttaat agcacttggc atgggaatga gactgaagac 
    1261 actaaagata ataaaacaat tacactccca tgcagaataa aacaaattgt aaacagatgg 
    1321 caggaagtag gaaaagcaat gtatgcccct cccatcgaag gactaattag atgttcatca 
    1381 aatattactg ggctgctatt aacaagagat ggtggtaata tcacgaacga gaatactact 
    1441 gagaccttca gacctggagg aggaaatatg agggataatt ggagaagtga attatataaa 
    1501 tataaagtgg taaaaattga accattagga gtagcaccca ccaaggcaaa aagaagagtg 
    1561 gtgcaaagag aaaaaagagc agcgggaata ggagctttgt tccttgggtt cttgggagca 
    1621 gcaggaagca ctatgggcgc agcatcactg acgctgacgg tacaggccag actattattg 
    1681 tctggtatag tgcaacagca gaataatttg ctgagagcta ttgaggcgca acaacatctg 
    1741 ttgcaactca cagtctgggg catcaagcag ctccaggcaa gagtcctggc tgtggaaaga 
    1801 tacctaaggg atcaacagct cctggggatt tggggttgct ctggaaaact catttgcacc 
    1861 actactgtgc cttggaatgg gagttggagt aataaaactt atgatgcaat ttgggataac 
    1921 atgacctgga tggattggga aagagaaatt gaaaattaca caggcgtaat atatgactta 
    1981 attgaacaat cgcaaaacca gcaagaaaag aatgaacaag aattattggc attagataaa 
    2041 tgggcaagtt tgtggaattg gtttgacata acaaaatggc tgtggtacat aaaaatattc 
    2101 ataatgatag taggaggctt aataggttta agaataattt ttactgtact ttctatagtg 
    2161 aatagagtta ggcagggata ctcaccatta tcgtttcaga cccacctccc agccccgagg 
    2221 ggacccgaca ggcccgacgg aatcgaagaa gaaggtggag agcaagacag agacagatcc 
    2281 ggtcgtttag caactggatt cttagcaatt gtctgggtcg acctgcggag cctgtgcctc 
    2341 ttcagctacc accgcttgag agacttactc ttgattgtga cgaggattgt ggaacttctg 
    2401 ggacgcaggg ggtgggaaat cctcaaatat tggtggaatc tcctacagta ttggagtcag 
    2461 gaactaaaga atagcgctgt tagcttgctt aatgccacag ccatagcagt agctgaaggg 
    2521 acagataggg ttatagaaat atttcaaaga gcttttagag ctattctcaa catacctact 
    2581 agaataagac agggcttgga aagggctttg ctataa
//
last modified: Tue May 31 10:56 2022


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