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LOCUS	    JQ438111		     520 bp    DNA     linear	VRL 04-JUN-2012
DEFINITION  HIV-1 isolate LCPIS00358 from Senegal envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   JQ438111
VERSION     JQ438111.1 GI:388817086
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 520)
            Show all sequences for reference 1
  AUTHORS   Jennes,W., Kyongo,J.K., Vanhommerig,E., Camara,M., Coppens,S.,
	    Seydi,M., Mboup,S., Heyndrickx,L. and Kestens,L.
  TITLE     Molecular Epidemiology of HIV-1 Transmission in a Cohort of HIV-1
	    Concordant Heterosexual Couples from Dakar, Senegal
  JOURNAL   PLoS ONE 7 (5), E37402 (2012)
  PUBMED    22615999
REFERENCE   2 (bases 1 to 520)
            Show all sequences for reference 2
  AUTHORS   Jennes,W., Kyongo,J.K., Vanhommerig,E., Camara,M., Coppens,S.,
	    Seydi,M., Mboup,S., Heyndrickx,L. and Kestens,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2012) Department of Biomedical Sciences,
	    Institute of Tropical Medicine, Nationalestraat 155, Antwerp,
	    Antwerp 2000, Belgium
FEATURES             Location/Qualifiers
     source	     1..520
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="LCPIS00358"
		     /isolation_source="peripheral blood mononuclear cells"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Senegal: Dakar"
		     /collection_date="09-Nov-2006"
     gene	     <1..>520
		     /gene="env"
     CDS	     <1..>520
		     /gene="env"
		     /note="gp41"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFK78983.1"
		     /db_xref="GI:388817087"
		     /translation="QLLSGIVQQQSNLLRAIEAQQHMLQLTVXGIKQLQARVLAIERY
		     LKDQQFLGLWGCSGKVICTTAVPWNSSWSNKSEADIWNNMTWMQWDKEIXXYXKTIXE
		     LLEXSXXQQEQNEKDLLALDXWBXLXSWFXITNWLWYIXIFIMIXGGLIXLXIXFAXI
		     SVXNXVXQGYSP"
BASE COUNT	165 a	  82 c	  111 g    130 t     32 other
ORIGIN
       1 gacaattgct gtctggtata gtgcaacagc aaagcaattt gctgagagct atagaggcgc 
      61 aacagcatat gttgcaactc acagtckggg gcattaagca gctccaggca agagtcctgg 
     121 ctatcgaaag atacctaaag gatcaacagt tcctaggact ttggggctgc tctggaaaag 
     181 tcatctgcac cactgctgtg ccttggaact ccagttggag taataaatct gaagcagata 
     241 tttggaataa catgacctgg atgcagtggg ataaagaaat tarwmmatac wcmaaaacaa 
     301 tayatgagtt gcttgaaraa tcwcawmacc arcaggaaca aaatgaaaaa gatttattag 
     361 cmttggacaa stggracast ctawggagtt ggtttaryat aacaaattgg ctgtggtata 
     421 taakaatatt cataatgata gkaggaggct tgatagrttt aaraatastt tttgctgyma 
     481 tctctgtart raatasagtt asgcagggat actcwccttt 
//
last modified: Tue May 31 10:56 2022


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