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LOCUS	    JQ438091		     520 bp    DNA     linear	VRL 04-JUN-2012
DEFINITION  HIV-1 isolate LCPIS00203 from Senegal envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   JQ438091
VERSION     JQ438091.1 GI:388817046
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 520)
            Show all sequences for reference 1
  AUTHORS   Jennes,W., Kyongo,J.K., Vanhommerig,E., Camara,M., Coppens,S.,
	    Seydi,M., Mboup,S., Heyndrickx,L. and Kestens,L.
  TITLE     Molecular Epidemiology of HIV-1 Transmission in a Cohort of HIV-1
	    Concordant Heterosexual Couples from Dakar, Senegal
  JOURNAL   PLoS ONE 7 (5), E37402 (2012)
  PUBMED    22615999
REFERENCE   2 (bases 1 to 520)
            Show all sequences for reference 2
  AUTHORS   Jennes,W., Kyongo,J.K., Vanhommerig,E., Camara,M., Coppens,S.,
	    Seydi,M., Mboup,S., Heyndrickx,L. and Kestens,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-JAN-2012) Department of Biomedical Sciences,
	    Institute of Tropical Medicine, Nationalestraat 155, Antwerp,
	    Antwerp 2000, Belgium
FEATURES             Location/Qualifiers
     source	     1..520
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="LCPIS00203"
		     /isolation_source="peripheral blood mononuclear cells"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Senegal: Dakar"
		     /collection_date="02-Mar-2006"
     gene	     <1..>520
		     /gene="env"
     CDS	     <1..>520
		     /gene="env"
		     /note="gp41"
		     /codon_start="3"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AFK78963.1"
		     /db_xref="GI:388817047"
		     /translation="QLLSGIVQQQSNXLRAIEAQQHMLRLTVWGIKQLQARVLALERY
		     LKDQQLLGIWGCSGKLICTTNVPWNSSWSNXXHDDIWXNXTWLZWDKEISNYSDIIYD
		     LLEKSQNQQEKNEQDLLALDKWSSLWSWFXITNWLWYIKIFXIIVGGLIGLRIVFXVL
		     TIINRVRQGYSP"
BASE COUNT	174 a	  79 c	  115 g    136 t     16 other
ORIGIN
       1 gacaattatt gtctggtata gtgcaacagc aaagtaattt kytgagggct atagaggctc 
      61 aacaacatat gttgagactc acggtctggg gcattaaaca gctccaggca agagtcctgg 
     121 ctctggaaag atacctaaag gatcaacagc tcctaggaat ttggggctgc tctggaaaac 
     181 tcatctgcac cactaatgta ccytggaayt ctagttggag taatarawcc catgatgaca 
     241 tatgggryaa ymygacctgg ctgsaatggg ataaagaaat tagcaattay tcagatataa 
     301 tatatgatct acttgaaaaa tcgcagaacc agcaggaaaa gaatgaacaa gacttgttgg 
     361 cattggacaa atggtcaagc ctgtggagtt ggtttarcat aacaaattgg ctgtggtata 
     421 taaaaatatt trtaataata gtaggaggat taataggctt aagaatagtt tttkctgtac 
     481 ttactataat aaatagagtt aggcagggat actcaccttt 
//
last modified: Tue May 31 10:56 2022


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