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LOCUS	    JN786685		    2701 bp    DNA     linear	VRL 30-OCT-2011
DEFINITION  HIV-1 clone 6568FL5-13-185.PRO from USA envelope glycoprotein-like
	    gene, complete sequence
ACCESSION   JN786685
VERSION     JN786685.1 GI:353741415
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2701)
            Show all sequences for reference 1
  AUTHORS   Gonzalez-Perez,M.P., O'Connell,O., Lin,R., Sullivan,W.M., Bell,J.,
	    Simmonds,P. and Clapham,P.R.
  TITLE     Independent evolution of macrophage-tropism and increased charge
	    between HIV-1 R5 envelopes present in brain and immune tissue.
  JOURNAL   Retrovirology. 2012 Mar 15;9:20. doi: 10.1186/1742-4690-9-20.
  PUBMED    22420378
REFERENCE   2 (bases 1 to 2701)
            Show all sequences for reference 2
  AUTHORS   Gonzalez-Perez,M.P., O'Connell,O., Lin,R., Sullivan,W.M., Bell,J.,
	    Simmonds,P. and Clapham,P.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-SEP-2011) Program in Molecular Medicine and
	    Department of Medical School, University of Massachusetts Medical
	    School, 373 Plantation Street Biotech II Suite 315, Worcester, MA
	    01605, USA
FEATURES             Location/Qualifiers
     source	     1..2701
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolation_source="patient 6568 frontal lobe"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="6568FL5-13-185.PRO"
		     /country="USA"
		     /collection_date="2001"
		     /note="subtype: B"
     misc_feature    1..2553
		     /note="similar to envelope glycoprotein"
BASE COUNT	921 a	 479 c	  670 g    631 t
ORIGIN
       1 gtgagagtga aggggatcag gaagaattat cagcactggt ggagaggggg catcttgctc 
      61 ctatggatat tgatgatctg tagggctgaa gaagacaagt gggtcacagt ctattatgga 
     121 gtacctgtgt ggaaagaagc agacaccact ctattttgtg cctcagatgc taaagcatat 
     181 acaacagagg cacataatgt ttgggccaca catgcctgtg tacccacaga ccccaatcca 
     241 caagaagtag tattagaaaa tgtgacagaa aattttaata tgtggaaaaa taacatggta 
     301 gaccagatgc atggggatgt aatcagctta tgggatcaaa gcctaaagcc atgtgtaaaa 
     361 ttaaccccac tctgtgttac tttaaattgc actgatgtga agaataatgg tactaatact 
     421 actagcaatg actgggaaac aatgaaggaa ggagaaataa agaactgttc tttcaatatc 
     481 accacagaca tgagagataa ggtagagaaa aaatatgcag ttttttatga ccttgatata 
     541 atgccaatag gtaataccaa caactatagg ttgataagtt gtaacacctc agtcattaca 
     601 caggcctgtc caaaggtatc ctttgaacca attcccatac attattgtgc cccggctggt 
     661 tttgcgattc taaagtgtaa tgataagacg ttcaatggaa caggacgatg ttacaatgtc 
     721 agcacagtac aatgtacaca tggaattagg ccagtagtat caactcaact gctgttaaac 
     781 ggcagtctag cagaaggaga ggtagtaatt agatctgaga atttcacgaa caatgctaaa 
     841 accataatag tacagttgaa agagcctgta aacattagtt gcacaagacc caacaacaat 
     901 acaagaaaaa gtatacatat agggccaggg agagcatttt ttgcaacaga cataatagga 
     961 gatataagac aggcacattg caacattagt aaagcagcat gggatgacac tttccaacag 
    1021 gtagcaaaaa aattaagagc acaatttgat aataagacaa taatctttaa tcactcctca 
    1081 ggaggggacc cagaaattgt aatgcacagt tttaattgtg gaggggaatt tttctactgt 
    1141 gatacaacaa aactgtttaa tagtaattat acctggaatg gtactgaaag tacaaatgaa 
    1201 actagaggaa atgagacaat cgcactcccg tgcagaatag aacaaattat aaacatgtgg 
    1261 caggaagtag gaaaagcaat gtatgcccct cccatcagtg gactacttaa ttgttcatca 
    1321 aatattacag gactactaat aacaagagat ggtggtaatg ggaacgggac caagccagag 
    1381 atcttcagac ctggaggagg agatatgagg gacaattgga gaagtgaatt atataaatat 
    1441 aaagtagtaa gaattgaacc aataggcata gcacccaccg aggcaaagag aagagtggtg 
    1501 cagagagaaa aaagagcagt gggaatagga gctttgttcc ttgggttctt gggagcagca 
    1561 ggaagcacta tgggcgcagc gtcaataacg ctgacggtac aggccagaca attattgtct 
    1621 ggtatagtgc aacagcagaa caacttgctg agggctattg aggcacaaca gcatctgttg 
    1681 caactcacag tctggggcat caagcagctc caggcaagag tcctagctgt ggaaagatac 
    1741 ctaagggatc aacagctcct gggaatttgg ggttgctctg gaaaactcat ctgcaccact 
    1801 gctgtgcctt ggaataatag ttggagtaat aaatctctga gtgctatttg gaataacatg 
    1861 acctggatgg agtgggaaag agaaattgac agttacacaa acataatata cagcttaatt 
    1921 gaagaatcgc agaaccaaca agaaaagaat gaacaggact tgttgaaatt ggatacatgg 
    1981 gcaagtttgt ggaattggtc tagcatatca aattggctgt ggtatataag gttattcata 
    2041 atgataatag gaggcttgat aggtttaaga atagttttta ctgtactttc catagtaaat 
    2101 aaagttaggc agggatactc acccttatcg tttcagaccc gccatctagc cccgagggga 
    2161 cccgacaggc ccgaaggaat cgaagaagaa ggtggagaca gagacagaga cagatccagt 
    2221 ccattagtgg gtggattctt agaaatcatc tgggtcgacc tgcggagcct gtgcctcttc 
    2281 agctaccacc gcttgagaga cttactcttg attgtaacaa ggattgtgga acttctggga 
    2341 cgcagggggt gggaactcct caaatattgg tggaacctcc tccagtattg gactcaggaa 
    2401 ctaaagaata gtgctattag cttgttcaac gccacagcca tagcagtagc tgaggggaca 
    2461 gataggatta tagcagtagc acaaagagcc tttagagcta tcctccacat acctagaaga 
    2521 ataagacagg gcttggaaag ggctttgcta taagatgggt ggcaagtggt caaaacgtag 
    2581 tatgcctgga tggtctacta caagggaaag aatgaggcga gctgagccag cagcagaaag 
    2641 ggggagacaa gttgagccag cagcagttgg ggtgggagca gtatctcgag acggatccag 
    2701 c
//
last modified: Tue May 31 10:56 2022


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