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LOCUS	    JN562820		    1408 bp    RNA     linear	VRL 24-OCT-2011
DEFINITION  HIV-1 isolate 4012_P_11 from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   JN562820
VERSION     JN562820.1 GI:353257349
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1408)
            Show all sequences for reference 1
  AUTHORS   Schnell,G., Joseph,S., Spudich,S., Price,R.W. and Swanstrom,R.
  TITLE     HIV-1 replication in the central nervous system occurs in two
	    distinct cell types.
  JOURNAL   PLoS. Pathog.. 7(10); e1002286 (2011)
  PUBMED    22007152
REFERENCE   2 (bases 1 to 1408)
            Show all sequences for reference 2
  AUTHORS   Schnell,G., Joseph,S., Spudich,S., Price,R.W. and Swanstrom,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2011) Microbiology and Immunology, University of
	    North Carolina at Chapel Hill, Chapel Hill, NC 27599-7295, USA
FEATURES             Location/Qualifiers
     source	     1..1408
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="4012_P_11"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="03-Sep-1997"
     gene	     <1..>1408
		     /gene="env"
     CDS	     <1..>1408
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AEQ76004.1"
		     /db_xref="GI:353257350"
		     /translation="CVTLNCTDLNKTNDTNKTNATNGGELMEKGEMKNCSFNITTNIR
		     DKRQKEYALFYKLDVVPIDDDNDNTSYRLISCNTSVITQACPKISFEPIPIHYCAPAG
		     FAIIKCNNKTFNGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVIIRSDNFTDN
		     AKTIIVQLKEAVEINCTRPNNNTRKSIHITPGKAFYATGDIIGNIRQAHCNISEKKWN
		     NTLKQIVTKLREQFGNKTIVFNQSSGGDPEIVMHTFNCGGEFFYCDTTQLFNSTWNGT
		     EESNDTESNITLTLPCRIKQIVNMWQEVGKAMYAPPIRGIISCSSNITGLLLVRDGGK
		     PNNETNNGTEVFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVG
		     LGAMFLGFLGAAGSTMGAASITLTVQARHLLSGIVQQQNNLLKAIEAQQHLLQLTVWG
		     IKQLQARVLAIERYLKDQQ"
BASE COUNT	543 a	 232 c	  298 g    335 t
ORIGIN
       1 tgtgttactt taaattgcac tgacttgaac aaaactaatg ataccaataa aaccaatgct 
      61 actaatggag gggaactgat ggaaaaagga gaaatgaaaa actgctcttt taatatcacc 
     121 acaaacataa gagataaaag gcagaaggaa tatgcacttt tttataaact tgatgtagta 
     181 ccaatagatg atgataatga taatactagc tataggttga taagttgtaa cacctcagtc 
     241 attacacagg catgtccaaa gatatccttt gaaccaattc ccatacatta ttgtgccccg 
     301 gctggttttg cgattataaa gtgtaataat aagacattca atggaaaagg gccatgtaca 
     361 aatgtcagca cagtacagtg tacacatgga attaggccag tagtatcaac tcaactgctg 
     421 ttaaatggca gtctagcaga agaagaggta ataattagat ctgacaattt cacagacaat 
     481 gctaaaacca taatagtaca gctaaaagaa gctgtagaaa ttaattgtac aagacccaac 
     541 aacaatacaa gaaaaagtat acatataaca ccagggaaag cattttatgc aacaggagac 
     601 ataataggaa atataagaca agcacattgt aacattagtg aaaaaaaatg gaataacact 
     661 ttaaaacaga tagttacaaa attaagagaa caatttggga ataagacaat agtctttaat 
     721 caatcctcag gaggggaccc agaaattgta atgcacactt ttaattgtgg aggggaattt 
     781 ttctactgtg atacaacaca attgtttaat agtacttgga atggtactga agagtcaaat 
     841 gacactgaaa gtaatatcac actcacactc ccatgcagaa taaaacaaat tgtaaacatg 
     901 tggcaggaag taggaaaagc aatgtatgcc cctcccatca gaggaataat tagctgctca 
     961 tcaaatatta cagggctgct attagtaaga gatggtggta agcccaataa tgagactaat 
    1021 aatggtactg aggtcttcag acctggagga ggaaatatga aggacaattg gagaagtgaa 
    1081 ttatataaat ataaagtagt aaaaattgaa ccattaggag tagcacccac taaggcaaaa 
    1141 agaagagtgg tgcagagaga gaaaagagca gtgggattag gagctatgtt ccttgggttc 
    1201 ttgggagcag caggaagcac tatgggcgca gcgtcaataa cgctgacggt acaggccaga 
    1261 cacttattgt ctggtatagt gcaacagcaa aacaatttgc tgaaggctat tgaggcgcaa 
    1321 cagcatctgt tgcaactcac agtctggggc atcaagcagc tccaggcaag agtcctggct 
    1381 atagaaagat acctaaagga tcaacagc
//
last modified: Tue May 31 10:56 2022


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