HIV Databases HIV Databases home HIV Databases home
HIV Sequence Database



Download: ENTIRE SEQUENCE SEQUENCE FRAGMENT start end
Format:  
View NCBI entry		Download GenBank file		Graphics View		Download GFF3 File

LOCUS	    JN125884		     291 bp    RNA     linear	VRL 09-NOV-2011
DEFINITION  HIV-1 isolate BN_31_G from France vpr protein (vpr) gene, complete
	    cds
ACCESSION   JN125884
VERSION     JN125884.1 GI:355526116
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 291)
            Show all sequences for reference 1
  AUTHORS   Fourati,S., Malet,I., Guenzel,C.A., Soulie,C., Maidou-Peindara,P.,
	    Morand-Joubert,L., Wirden,M., Sayon,S., Peytavin,G., Simon,A.,
	    Katlama,C., Benichou,S., Calvez,V. and Marcelin,A.-G.
  TITLE     E17A mutation in HIV-1 Vpr confers resistance to didanosine in
	    association with thymidine analog mutations.
  JOURNAL   Antiviral. Res.. 93(1); 167-74 (2012)
  PUBMED    22138483
REFERENCE   2 (bases 1 to 291)
            Show all sequences for reference 2
  AUTHORS   Fourati,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-JUN-2011) Virology, INSERM U943, 83, Blvd de
	    l''Hopital, Paris 75013, France
FEATURES             Location/Qualifiers
     source	     1..291
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="BN_31_G"
		     /isolation_source="plasma"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="France"
		     /collection_date="2008"
     gene	     1..291
		     /gene="vpr"
     CDS	     1..291
		     /gene="vpr"
		     /codon_start="1"
		     /transl_table="1"
		     /product="vpr protein"
		     /protein_id="AET05855.1"
		     /db_xref="GI:355526117"
		     /translation="MEQAPEDQGPPREPYNEWALELLEELKNEAVRHFPRVWLHGLGQ
		     YIYETYGDTWTGVEALIRTLQQLLFIHFRIGCQHSRIGIVRQRRARNGASRS"
BASE COUNT	 94 a	  51 c	   77 g     69 t
ORIGIN
       1 atggaacaag ccccagaaga ccaagggcca ccgagggagc catacaatga atgggcacta 
      61 gagcttttag aggagcttaa gaatgaagct gttagacatt ttcctagggt ttggctccat 
     121 ggcttagggc aatatatcta tgaaacttat ggggatactt ggacaggagt ggaagcctta 
     181 ataagaactc tacaacaact gttgtttatt catttcagaa ttgggtgtca acatagcaga 
     241 ataggcattg ttcgacagag gagagcaaga aatggagcca gtagatccta g
//
last modified: Tue May 31 10:56 2022


Questions or comments? Contact us at seq-info@lanl.gov.

 
Operated by Triad National Security, LLC for the U.S. Department of Energy's National Nuclear Security Administration
© Copyright Triad National Security, LLC. All Rights Reserved | Disclaimer/Privacy

Dept of Health & Human Services Los Alamos National Institutes of Health