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LOCUS	    JF906660		    1201 bp    RNA     linear	VRL 14-SEP-2011
DEFINITION  HIV-1 isolate BJ07525 from China pol protein (pol) and gag protein
	    (gag) genes, partial cds
ACCESSION   JF906660
VERSION     JF906660.1 GI:336360099
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1201)
            Show all sequences for reference 1
  AUTHORS   Ye,J.R., Lu,H.Y., Wang,W.S., Guo,L., Xin,R.L., Yu,S.Q., Wu,T.C.,
	    Zeng,Y. and He,X.
  TITLE     The Prevalence of Drug Resistance Mutations Among Treatment-Naive
	    HIV-Infected Individuals in Beijing, China.
  JOURNAL   AIDS Res Hum Retroviruses. 2011 Aug 10.
  PUBMED    21830915
REFERENCE   2 (bases 1 to 1201)
            Show all sequences for reference 2
  AUTHORS   Ye,J.-R., Lu,H.-Y., Xin,R.-L., Yu,S.-Q., Wang,W.-S., He,X. and
	    Zeng,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2011) National Institute for Viral Disease
	    Control and Prevention, China Center for Disease Prevention and
	    Control, Yingxin Street Xuan Wu District, Beijng 100052, China
COMMENT     Annotation information was provided by the author. Some of the
	    information does not have GenBank feature identifiers and is being
	    provided in the comment section. Information in this section is
	    searchable in HIV Database at Los Alamos (www.hiv.lanl.gov).;
	    ##HIVDataBaseData-START## Sequence Name BJ07525 Sample city Beijing
	    Culture method primary Sample tissue plasma Patient sex M Patient
	    age 24 Risk factor SM CD4 count 542 ##HIVDataBaseData-END##
FEATURES             Location/Qualifiers
     source	     1..1201
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="BJ07525"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="01-Sep-2007"
		     /note="subtype: CRF01_AE"
     gene	     <1..>1201
		     /gene="pol"
     CDS	     <1..>1201
		     /gene="pol"
		     /codon_start="3"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AEI53839.1"
		     /db_xref="GI:336360101"
		     /translation="SFPQITLWQRPLITIKIGGQVKEALLDTGADDTVLEDINLPGKW
		     KPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFP
		     ISPINTVPVTLKPGMDGPKVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTP
		     VFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFS
		     VPLDESFRKYTAFTIPSRNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQN
		     PEMVIYQYMDDLYVGSDLEIGQHRTKIDELRAHLLSWGFTTPDKKHQKEPPFLWMGYE
		     LHPDRWTVQPIELPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGTKALTD
		     VVPLTEEA"
     gene	     <1..48
		     /gene="gag"
     CDS	     <1..48
		     /gene="gag"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AEI53838.1"
		     /db_xref="GI:336360100"
		     /translation="SVSLKSLFGNDPSSQ"
BASE COUNT	467 a	 200 c	  256 g    278 t
ORIGIN
       1 tcagtttccc tcaaatcact ctttggcaac gacccctcat cacaataaaa ataggaggac 
      61 aggtgaaaga agctctatta gatacaggag cagatgacac agtgttagaa gatataaatt 
     121 taccaggaaa atggaaacca aaaatgatag ggggaattgg aggttttatc aaagtaaggc 
     181 aatatgatca gatacttata gaaatttgtg gaaaaaaggc tataggtaca gtgttggtag 
     241 gacccacacc tgtcaacata attggacgaa atatgttgac tcagattggt tgtactttaa 
     301 attttccaat tagtcctatt aacactgtac cagtaacatt aaagccagga atggatggac 
     361 caaaggttaa acagtggcca ttgacagaag aaaaaataaa agcattaaca gaaatctgta 
     421 aggaaatgga agaggaagga aaaatctcaa aaattgggcc tgaaaatcca tataatactc 
     481 cagtatttgc tataaagaaa aaggacagca ccaaatggag gaaattagta gatttcagag 
     541 agctcaataa aagaactcag gacttttggg aagttcaatt aggaataccg catccagcag 
     601 gattaaaaaa gaaaaaatca gtgacagtac tagatgtggg agatgcatat ttttcagtcc 
     661 ctttagatga aagctttaga aagtatactg cattcaccat acctagtaga aacaatgaga 
     721 caccagggat cagatatcag tacaatgtgc taccacaggg atggaaagga tctccggcaa 
     781 tattccagtg tagcatgaca aaaatcttag agccctttag aaaacaaaat ccagagatgg 
     841 ttatctatca atacatggat gacttgtatg taggatctga tttagaaata ggacagcaca 
     901 gaacaaaaat agatgagcta agagctcatc tattgagctg gggatttact acaccagaca 
     961 aaaaacatca gaaggaacca ccatttcttt ggatgggata tgaactccat ccggacagat 
    1021 ggacagtcca gcctatagaa ctgccagaaa aagacagctg gactgtcaat gatatacaga 
    1081 aattagtggg aaaactaaat tgggcaagtc aaatttatcc agggattaag gtaaagcaac 
    1141 tgtgtaaact cctcagggga actaaagcat taacagacgt agtaccactg actgaagaag 
    1201 c
//
last modified: Tue May 31 10:56 2022


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