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LOCUS	    JF906637		    1201 bp    RNA     linear	VRL 14-SEP-2011
DEFINITION  HIV-1 isolate BJ07407 from China pol protein (pol) and gag protein
	    (gag) genes, partial cds
ACCESSION   JF906637
VERSION     JF906637.1 GI:336360031
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1201)
            Show all sequences for reference 1
  AUTHORS   Ye,J.R., Lu,H.Y., Wang,W.S., Guo,L., Xin,R.L., Yu,S.Q., Wu,T.C.,
	    Zeng,Y. and He,X.
  TITLE     The Prevalence of Drug Resistance Mutations Among Treatment-Naive
	    HIV-Infected Individuals in Beijing, China.
  JOURNAL   AIDS Res Hum Retroviruses. 2011 Aug 10.
  PUBMED    21830915
REFERENCE   2 (bases 1 to 1201)
            Show all sequences for reference 2
  AUTHORS   Ye,J.-R., Lu,H.-Y., Xin,R.-L., Yu,S.-Q., Wang,W.-S., He,X. and
	    Zeng,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2011) National Institute for Viral Disease
	    Control and Prevention, China Center for Disease Prevention and
	    Control, Yingxin Street Xuan Wu District, Beijng 100052, China
COMMENT     Annotation information was provided by the author. Some of the
	    information does not have GenBank feature identifiers and is being
	    provided in the comment section. Information in this section is
	    searchable in HIV Database at Los Alamos (www.hiv.lanl.gov).;
	    ##HIVDataBaseData-START## Sequence Name BJ07407 Sample city Beijing
	    Culture method primary Sample tissue plasma Patient sex M Patient
	    age 29 Risk factor NR CD4 count 266 ##HIVDataBaseData-END##
FEATURES             Location/Qualifiers
     source	     1..1201
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="BJ07407"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="01-Sep-2007"
		     /note="subtype: B"
     gene	     <1..>1201
		     /gene="pol"
     CDS	     <1..>1201
		     /gene="pol"
		     /codon_start="3"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AEI53794.1"
		     /db_xref="GI:336360033"
		     /translation="NLPQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEDMNLPGRW
		     KPKMIGGIGGFIKVRQYDQIPIEICGHKTEGTVLIGPTPVNIIGRNLLTQLGCTLNFP
		     ISPIETVPVXLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTP
		     VFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFS
		     VPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQN
		     PDIVIYQYMDDLYVGSDLEIGQHRAKIEXLRQHLLRWGFTTPDKKHQKEPPFLWMGYE
		     LHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKELCKLIRGTKALTE
		     VVPLTEEA"
     gene	     <1..48
		     /gene="gag"
     CDS	     <1..48
		     /gene="gag"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="AEI53793.1"
		     /db_xref="GI:336360032"
		     /translation="LTSLKSLFGNDPSSQ"
BASE COUNT	461 a	 202 c	  255 g    281 t      2 other
ORIGIN
       1 ttaacctccc tcaaatcact ctttggcaac gacccctcgt cacaataagg ataggggggc 
      61 aattaaagga agctctatta gatacaggag cagatgatac agtattagaa gacatgaatt 
     121 tgccaggaag atggaaacca aaaatgatag ggggaattgg aggttttatc aaagtaagac 
     181 agtatgatca gatacccata gaaatctgtg gacacaagac tgaaggtaca gtattaatag 
     241 gacctacacc tgtcaacata attggaagaa acctgttgac tcagcttggt tgcactttaa 
     301 attttcccat tagtcctatt gaaactgtac cagtaaratt aaagccagga atggatggcc 
     361 caaaagttaa acaatggcca ttgacagaag aaaaaataaa agcattagta gaaatttgta 
     421 cagaaatgga aaaggaaggg aaaatttcaa aaattgggcc tgaaaatcca tacaatactc 
     481 cagtatttgc cataaagaaa aaagacagta ctaaatggag aaaattagta gatttcaggg 
     541 aacttaataa aagaactcaa gacttctggg aagttcaatt aggaatacca catcccgcag 
     601 ggttaaaaaa gaagaagtcc gtaacagtcc tggatgtggg tgatgcatat ttctcagtcc 
     661 ctttagataa agacttcagg aagtatactg cattcaccat acctagtata aacaatgaga 
     721 caccagggat cagatatcag tacaatgtac ttccacaggg atggaaagga tcaccagcaa 
     781 tatttcaatg tagtatgaca aaaattttgg agccttttag aaaacaaaat ccagacatag 
     841 ttatctatca atacatggat gatttgtatg taggatctga cttagaaata gggcagcata 
     901 gagcaaaaat agagraacta agacagcatc tgttgaggtg gggatttacc acaccagaca 
     961 aaaaacatca gaaagaacct ccatttcttt ggatgggtta tgaactccat cctgacaaat 
    1021 ggacagtaca gcctatagtg ctgccagaaa aggacagctg gactgtcaat gacatacaga 
    1081 agttagtggg aaagttaaat tgggcaagtc agatttatgc agggattaag gtaaaggaat 
    1141 tatgtaaact cattagggga accaaagcac taacagaagt agtaccacta acagaagaag 
    1201 c
//
last modified: Tue May 31 10:56 2022


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