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LOCUS	    JF906617		    1201 bp    RNA     linear	VRL 14-SEP-2011
DEFINITION  HIV-1 isolate BJ07350 from China pol protein (pol) gene, partial
	    cds; and nonfunctional gag protein (gag) gene, partial sequence
ACCESSION   JF906617
VERSION     JF906617.1 GI:336359972
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1201)
            Show all sequences for reference 1
  AUTHORS   Ye,J.R., Lu,H.Y., Wang,W.S., Guo,L., Xin,R.L., Yu,S.Q., Wu,T.C.,
	    Zeng,Y. and He,X.
  TITLE     The Prevalence of Drug Resistance Mutations Among Treatment-Naive
	    HIV-Infected Individuals in Beijing, China.
  JOURNAL   AIDS Res Hum Retroviruses. 2011 Aug 10.
  PUBMED    21830915
REFERENCE   2 (bases 1 to 1201)
            Show all sequences for reference 2
  AUTHORS   Ye,J.-R., Lu,H.-Y., Xin,R.-L., Yu,S.-Q., Wang,W.-S., He,X. and
	    Zeng,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAY-2011) National Institute for Viral Disease
	    Control and Prevention, China Center for Disease Prevention and
	    Control, Yingxin Street Xuan Wu District, Beijng 100052, China
COMMENT     Annotation information was provided by the author. Some of the
	    information does not have GenBank feature identifiers and is being
	    provided in the comment section. Information in this section is
	    searchable in HIV Database at Los Alamos (www.hiv.lanl.gov).;
	    ##HIVDataBaseData-START## Sequence Name BJ07350 Sample city Beijing
	    Culture method primary Sample tissue plasma Patient sex M Patient
	    age 28 Risk factor SM CD4 count 411 ##HIVDataBaseData-END##
FEATURES             Location/Qualifiers
     source	     1..1201
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="BJ07350"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="China"
		     /collection_date="01-Sep-2007"
		     /note="subtype: B"
     gene	     <1..>1201
		     /gene="pol"
     CDS	     <1..>1201
		     /gene="pol"
		     /codon_start="3"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AEI53754.1"
		     /db_xref="GI:336359973"
		     /translation="NLPQITLWQRPVVIIKIGGQLKEALLDTGADDTVLEEMNLPGRW
		     KPKMIGGIGGFIKVRQYDQIAIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNFP
		     ISPIDTVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTP
		     VFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFS
		     VPLDEDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQN
		     PDIVIYQYMDDIYVGSDLEIEQHRIKIEELREHLLRWGLTTPDKKHQKEPPFLWMGYE
		     LHPDKWTVQPIQLPEKDCWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTE
		     VVPLTEEA"
     gene	     <1..48
		     /gene="gag"
     misc_feature    <1..48
		     /gene="gag"
		     /note="nonfunctional gag protein due to mutation"
BASE COUNT	475 a	 195 c	  248 g    283 t
ORIGIN
       1 gtaacctccc tcaaatcact ctttggcaac gacccgtcgt cataataaag ataggggggc 
      61 aactaaagga agctctatta gatacaggag cagatgatac agtattagaa gaaatgaatt 
     121 taccaggaag atggaaacca aaaatgatag ggggaattgg aggttttatc aaagtaagac 
     181 aatatgatca gatagccata gaaatctgtg gacataaagc tataggtaca gtattaatag 
     241 gacctacacc tgtcaatata attggaagaa atctgttgac tcagcttggc tgtactttaa 
     301 attttcccat tagtcctatt gatactgtac cagtaaaatt aaagccagga atggatggtc 
     361 caaaagttaa acaatggcca ttgacagaag aaaaaataaa ggcattagta gaaatttgta 
     421 cagaaatgga aaaggaagga aaaatttcaa aaattgggcc tgaaaatcca tataatactc 
     481 cagtatttgc cataaagaaa aaagacagta ctaaatggag aaaattagta gatttcagag 
     541 aacttaataa gagaactcaa gacttctggg aagttcaatt aggaatacca catccagcag 
     601 ggttaaaaaa gaaaaaatca gtaacagtac tggatgtggg tgatgcatac ttttcagttc 
     661 ccttagatga agacttcagg aagtatactg catttaccat acctagtgta aacaatgaga 
     721 caccagggat tagatatcag tacaatgtgc ttccacaggg gtggaaagga tcaccagcaa 
     781 tattccaaag tagcatgaca aaaatcttag agccttttag aaaacaaaat ccagacatag 
     841 ttatctatca atacatggat gatatatatg taggatctga cttagaaata gaacagcata 
     901 gaataaaaat agaggaactg agagaacatc tgttgaggtg gggacttacc acaccagaca 
     961 aaaaacatca gaaagaacct ccattccttt ggatgggtta tgaactccat cctgataaat 
    1021 ggacagtaca gcctatacaa ctaccagaaa aagactgctg gactgtcaat gacatacaga 
    1081 agttagtggg aaaactgaat tgggcaagtc agatttatgc agggattaaa gtaaagcaat 
    1141 tatgtaaact ccttagggga accaaggcac taacagaagt agtaccacta acagaagaag 
    1201 c
//
last modified: Tue May 31 10:56 2022


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