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LOCUS	    JF706463		    2517 bp    RNA     linear	VRL 12-APR-2011
DEFINITION  HIV-1 isolate KM34SeR21 from Cameroon envelope glycoprotein (env)
	    gene, complete cds
ACCESSION   JF706463
VERSION     JF706463.1 GI:328550349
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2517)
            Show all sequences for reference 1
  AUTHORS   Brown,R.J.P., Peters,P.J., Caron,C., Gonzalez-Perez,M.P.,
	    Stones,L., Ankghuambom,C., Pondei,K., McClure,C.P., Alemnji,G.,
	    Taylor,S., Sharp,P.M., Clapham,P.R. and Ball,J.K.
  TITLE     Intercompartmental Recombination of HIV-1 Contributes to env
	    Intrahost Diversity and Modulates Viral Tropism and Sensitivity to
	    Entry Inhibitors.
  JOURNAL   J. Virol.. 85(12); 6024-37 (2011)
  PUBMED    21471230
REFERENCE   2 (bases 1 to 2517)
            Show all sequences for reference 2
  AUTHORS   Brown,R.J.P., Peters,P.J., Caron,C., Paz Gonzalez-Perez,M.,
	    Stones,L., Ankghuambom,C., Pondei,K., McClure,C.P., Alemnji,G.,
	    Taylor,S., Sharp,P.M., Clapham,P.R. and Ball,J.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2011) School of Molecular Medical Sciences, The
	    University of Nottingham, Queen''s Medical Centre, Nottingham NG7
	    7UH, UK
FEATURES             Location/Qualifiers
     source	     1..2517
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="KM34SeR21"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Cameroon"
		     /collection_date="27-Mar-2006"
		     /note="subtype: U"
     gene	     1..2517
		     /gene="env"
     CDS	     1..2517
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AEB22029.1"
		     /db_xref="GI:328550350"
		     /translation="MKARGTQMSWPHWWKWGTLILGLVIICSASDLWVTVYYGVPVWK
		     DAVTTLFCASDAKAYDREVHNVWATHACVPTDPDPQEMFLVNVSESFNMWENNMVDQM
		     HTDIISLWDQSLKPCVQLTPLCVTLNCTDANKTSTDPLREVKNCSFNITTELKDKQKK
		     EYALFYRVDVVPINSNNSSYRLINCNTSTVTQACPKVSFEPIPIHYCAPAGFAILKCN
		     DKRFNGTGLCKNVSTVQCTHGIRPVVTTQLLLNGSLSENGTIIRSKNISDNTKNIIVQ
		     FNKTVAINCTRPNNNTRKSVHIGPGQTFYATGDIIGDIRQAHCNVSEKEWNEALQQVV
		     TQLGEHFKDRNISFTNSSGGDLEIVTHSFNCGGEFFYCNTTNLFNSTWETNSNNTNNT
		     MSNGTITLPCKIKQIINMWQRVGRAMYAPPIAGKIQCNSNITGLILTRDGGNTSDEIF
		     RPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRQVVQKVKRAVGIGAVFLGFLGAA
		     GSTMGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQARLLAVE
		     RYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKTHDDIWENMTWMQWEKEISNYTDTI
		     YGLIEKAQNQQEKNEQELLALDKWASLWSWFSITNWLWYIRLFIMIVGGLIGLRIVFA
		     VLNIINRCRQGYSPLSFQTLTHHQKGPDRPGEIEEGGGEQDKDRSVRLVSGFFALAWD
		     DLRSLCLFSYHHLRDFTLIAVRTVTRGLQLGWEALKYLWNLLAYWGQEIKNSAINLLD
		     TTAIAVANWTDRVIEIGQRVGRAILHIPRRIRQGFKRALL"
BASE COUNT	887 a	 439 c	  577 g    614 t
ORIGIN
       1 atgaaagcga gggggacaca gatgagttgg ccacactggt ggaaatgggg aactttgatc 
      61 cttgggttgg tgataatttg tagtgcctca gacttgtggg ttacagttta ttatggggtt 
     121 cctgtgtgga aagatgcagt taccacccta ttttgtgcat cagatgctaa agcatatgat 
     181 agagaggtac ataatgtctg ggctacacat gcctgtgtac ctacagatcc cgacccacaa 
     241 gaaatgtttc tagtaaatgt atcagaaagt tttaacatgt gggagaataa catggtagac 
     301 cagatgcata cagacataat cagtttatgg gatcaaagct taaagccatg tgtacaatta 
     361 accccactct gtgttacttt aaattgtact gatgctaata aaactagcac cgaccccctg 
     421 cgggaagtaa aaaactgttc tttcaatata accacagaat taaaagataa acagaaaaaa 
     481 gaatatgcat tgttttatag ggttgatgta gtaccaatca acagcaacaa cagtagttat 
     541 aggctaataa attgtaatac ctcaactgtt acacaggctt gtccaaaggt atcctttgag 
     601 ccaattccca tacattattg tgctcctgct ggttttgcga ttctaaagtg taatgataaa 
     661 aggttcaatg ggacagggct atgcaagaat gtcagcacag tacaatgcac acatggaatt 
     721 agaccagtgg tgacaactca actactgtta aatggcagtc tatcagaaaa tggtacaata 
     781 attagatcta aaaatatctc agataataca aaaaacataa tagtacagtt taataaaact 
     841 gtagcaatta attgtacaag acccaacaac aatacaagaa aaagtgtaca tataggacca 
     901 ggacaaacat tctatgcaac aggtgacata ataggggata taagacaagc acattgtaat 
     961 gtcagtgaaa aagaatggaa tgaagcttta caacaggtag ttacacaatt aggggaacac 
    1021 tttaaagaca gaaatataag ctttactaac agttcaggag gggatttaga aattgtaaca 
    1081 catagtttta attgtggagg agaattcttc tattgcaata caacaaatct atttaacagc 
    1141 acttgggaaa caaactcaaa taacacaaat aacacaatgt caaatggcac tataactctc 
    1201 ccatgcaaaa taaaacaaat tataaacatg tggcaaagag tagggcgagc aatgtatgcc 
    1261 cctcccattg ccggaaaaat tcaatgtaac tcaaatatca caggtctcat attaacaaga 
    1321 gatggtggta atacaagtga tgagatcttc agacctggag ggggagacat gagagacaac 
    1381 tggagaagtg aactgtataa atataaggta gtgaaaattg aaccactagg agtagcaccc 
    1441 accagggcaa aaagacaagt ggtgcagaaa gtaaaaagag cagtgggaat aggagctgtg 
    1501 ttccttgggt tcttgggagc agcaggaagc actatgggcg cggcgtcaat aacgctgacg 
    1561 gtacaggcca gacaattatt gtctggtata gtgcaacagc aaagcaattt gctgaaggct 
    1621 atagaagcgc aacagcatct gttgcagctc acagtctggg gcattaaaca gctccaggcg 
    1681 agactcctgg ctgtggaaag atacctaaag gaccaacagc ttctagggat ttggggctgc 
    1741 tctggaaaac tcatctgcac cactaatgtg ccctggaatt ctagttggag taataaaact 
    1801 catgacgaca tttgggaaaa catgacctgg atgcaatggg aaaaggagat tagcaattac 
    1861 acagacacaa tatacggatt aattgaaaaa gcacaaaacc agcaggaaaa gaatgaacag 
    1921 gaattattgg cattggacaa atgggcaagt ctgtggagtt ggtttagcat aacaaattgg 
    1981 ctatggtata taagattatt tataatgata gtaggaggtt taatagggtt aagaatagtt 
    2041 tttgctgtgc ttaatataat aaatagatgt aggcagggat actcaccttt gtcattccag 
    2101 acccttaccc accaccagaa gggacccgac aggcccggag aaatcgaaga aggaggtgga 
    2161 gagcaagaca aagacagatc cgtgagatta gtgagcggat tctttgcgct tgcctgggac 
    2221 gacctgcgga gcctgtgcct cttcagttac caccacttga gagacttcac attaattgca 
    2281 gtgaggactg tgaccagggg actgcaactg gggtgggaag ccctcaaata tctgtggaat 
    2341 cttctagcat actggggtca ggagataaag aatagtgcta ttaatttgct tgatacaaca 
    2401 gcaatagcag tagctaactg gacagataga gttatagaaa taggacaaag agttggtaga 
    2461 gctattctcc acatacccag aagaataaga caaggtttta aaagggcttt gctataa
//
last modified: Tue May 31 10:56 2022


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