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LOCUS	    JF706448		    2541 bp    RNA     linear	VRL 12-APR-2011
DEFINITION  HIV-1 isolate KM34BlR1 from Cameroon envelope glycoprotein (env)
	    gene, complete cds
ACCESSION   JF706448
VERSION     JF706448.1 GI:328550320
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2541)
            Show all sequences for reference 1
  AUTHORS   Brown,R.J.P., Peters,P.J., Caron,C., Gonzalez-Perez,M.P.,
	    Stones,L., Ankghuambom,C., Pondei,K., McClure,C.P., Alemnji,G.,
	    Taylor,S., Sharp,P.M., Clapham,P.R. and Ball,J.K.
  TITLE     Intercompartmental Recombination of HIV-1 Contributes to env
	    Intrahost Diversity and Modulates Viral Tropism and Sensitivity to
	    Entry Inhibitors.
  JOURNAL   J. Virol.. 85(12); 6024-37 (2011)
  PUBMED    21471230
REFERENCE   2 (bases 1 to 2541)
            Show all sequences for reference 2
  AUTHORS   Brown,R.J.P., Peters,P.J., Caron,C., Paz Gonzalez-Perez,M.,
	    Stones,L., Ankghuambom,C., Pondei,K., McClure,C.P., Alemnji,G.,
	    Taylor,S., Sharp,P.M., Clapham,P.R. and Ball,J.K.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAR-2011) School of Molecular Medical Sciences, The
	    University of Nottingham, Queen''s Medical Centre, Nottingham NG7
	    7UH, UK
FEATURES             Location/Qualifiers
     source	     1..2541
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="KM34BlR1"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Cameroon"
		     /collection_date="27-Mar-2006"
		     /note="subtype: U"
     gene	     1..2541
		     /gene="env"
     CDS	     1..2541
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AEB22015.1"
		     /db_xref="GI:328550321"
		     /translation="MKARGTQMSWPCLWKWGTLILGLVIICRASDLWVTVYYGVPVWK
		     DAETTLFCASDAKAYDKEVHNVWATHACVPTDPNPQERILENVSESFNMWENNMVDQM
		     HTDIVSLWDQSLKPCVQLTPLCVTLNCTDVNTNTSSANNTLPEEQGAIKNCSFNITTE
		     LKDKQKKEYALFYRVDVVPINNNSSSSYRLINCNTSTVTQACPKVSFEPIPIHYCAPA
		     GFAILKCNDKRFNGTGLCKNVSTVQCTHGIRPVVTTQLLLNGSLSENGTIIRSKNISD
		     NTKNIIVQFNKTVAINCTRPNNNTRKSVHIGPGQTFYATGDIIGDIRKAHCNVSEKEW
		     NEALQQVVTQLGEHFKDRNISFTNSSGGDLEIVTHSFNCGGEFFYCNTTNLFNSTWET
		     NSNNTNNTMSNGTITLPCKIKQIINMWQRVGRAMYAPPIAGKIQCNSNITGLILTRDG
		     GNTSDEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRQVVQRAKRAVGIGAV
		     FLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQL
		     QARLLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKSHDDIWENMTWMQWEKE
		     ISNYTDTIYGLIEKAQNQQEKNEQELLALDKWASLWSWFSITNWLWYIRLFIMIVGGL
		     IGLRIVFAVLNIINRCRQGYSPLSFQTLTHHQRGPDRPGEIEEGGGEQDKDRSVRLVS
		     GFFALAWDDLRSLCLFSYHHLRDFTLIAVRTVTRGLQLGWEVLKYLWNLLAYWGQEIK
		     NSAINLLDTTAIAVANWTDRVIEIGQRVGRAILHIPRRIRQGFERALL"
BASE COUNT	895 a	 437 c	  590 g    619 t
ORIGIN
       1 atgaaagcga gggggacaca gatgagttgg ccatgcttgt ggaaatgggg gactttgatc 
      61 cttgggttgg tgataatttg tagggcctca gacttgtggg ttacagttta ttatggggtt 
     121 cctgtgtgga aagatgcaga gaccacccta ttttgtgcat cagatgctaa agcatatgat 
     181 aaagaggtac ataatgtctg ggctacacat gcctgtgtac ctacagatcc caacccacaa 
     241 gaaaggattc tagaaaatgt atcagaaagt tttaacatgt gggagaataa catggtggac 
     301 cagatgcata cagacatagt cagtttatgg gatcaaagct taaagccatg tgtacagcta 
     361 accccactct gtgttacttt aaattgtact gatgttaata ctaatactag tagtgctaat 
     421 aacaccctgc cggaagaaca aggggcaata aaaaactgtt ctttcaatat aaccacagaa 
     481 ttaaaagata aacagaaaaa agaatatgca ttgttttata gggttgatgt agtaccaatc 
     541 aacaacaaca gcagtagtag ttataggcta ataaattgta atacctcaac tgttacacag 
     601 gcttgtccaa aggtatcctt tgagccaatt cccatacatt attgtgctcc tgctggtttt 
     661 gcgattctaa agtgtaatga taaaaggttc aatgggacag ggctatgtaa gaatgtcagc 
     721 acagtacaat gcacacatgg aattagacca gtggtgacaa ctcaactact gttaaatggc 
     781 agtctatcag aaaatggtac aataattaga tctaaaaata tctcagataa tacaaaaaac 
     841 ataatagtac agtttaataa aactgtagca attaattgta caagacccaa caacaataca 
     901 agaaaaagtg tacatatagg accaggacaa acattctatg caacaggtga cataataggg 
     961 gatataagaa aagcacattg taatgtcagt gaaaaagaat ggaatgaagc tttacaacag 
    1021 gtagttacac aattagggga acactttaaa gacagaaata taagctttac taacagttca 
    1081 ggaggggatt tagaaattgt aacacatagt tttaattgtg gaggagaatt cttctattgc 
    1141 aatacaacaa atctatttaa cagcacttgg gaaacaaact caaataacac aaataacaca 
    1201 atgtcaaatg gcactataac tctcccatgc aaaataaaac aaattataaa catgtggcaa 
    1261 agagtagggc gagcaatgta tgcccctccc attgccggaa aaattcaatg taactcaaat 
    1321 atcacaggtc tcatattaac aagagatggt ggtaatacaa gtgatgagat cttcagacct 
    1381 ggagggggag acatgagaga caactggaga agtgaactgt ataaatataa ggtagtgaaa 
    1441 attgaaccac taggagtagc acccaccagg gcaaaaagac aagtggtgca gagagcaaaa 
    1501 agagcagtgg gaataggagc tgtgttcctt gggttcttgg gagcagcagg aagcactatg 
    1561 ggcgcggcgt caataacgct gacggtacag gccagacaat tattgtctgg tatagtgcaa 
    1621 cagcaaagca atttgctgaa ggctatagaa gcgcaacagc atctgttgca gctcacagtc 
    1681 tggggcatta aacagctcca ggcgagactc ctggctgtgg aaagatacct aaaggaccag 
    1741 cagcttctag ggatttgggg ctgctctgga aaactcatct gcaccactaa tgtgccctgg 
    1801 aattctagtt ggagtaataa atctcatgac gacatttggg aaaacatgac ctggatgcaa 
    1861 tgggaaaagg agattagcaa ttacacagac acaatatacg gattaattga aaaagcacaa 
    1921 aaccagcagg aaaagaatga acaggaatta ttggcattgg acaaatgggc aagtctgtgg 
    1981 agttggttta gcataacaaa ttggctatgg tatataagat tatttataat gatagtagga 
    2041 ggtttaatag ggttaagaat agtttttgct gtgcttaata taataaatag atgtaggcag 
    2101 ggatactcac ctttgtcatt ccagaccctt acccaccacc agaggggacc cgacaggccc 
    2161 ggagaaatcg aagaaggagg tggagagcaa gacaaagaca gatccgtgag attagtgagc 
    2221 ggattctttg cgcttgcctg ggacgacctg cggagcctgt gcctcttcag ttaccaccac 
    2281 ttgagagact tcacattaat tgcagtgagg actgtgacca ggggactgca actggggtgg 
    2341 gaagtcctca aatatctatg gaatcttcta gcatactggg gtcaggagat aaagaatagt 
    2401 gctattaatt tgcttgatac aacagcaata gcagtagcta actggacaga tagagttata 
    2461 gaaataggac aaagagttgg tagagctatt ctccacatac ccagaagaat aagacaaggt 
    2521 tttgaaaggg ctttgctata a
//
last modified: Tue May 31 10:56 2022


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