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HIV Sequence Database



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LOCUS	    JF298238		    2179 bp    DNA     linear	VRL 13-AUG-2011
DEFINITION  Simian immunodeficiency virus isolate 251stx31 envelope
	    glycoprotein (env) gene, partial cds
ACCESSION   JF298238
VERSION     JF298238.1 GI:343131352
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus (SIV)
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2179)
            Show all sequences for reference 1
  AUTHORS   Ma,Z.-M., Keele,B.F., Qureshi,H., Stone,M., Desilva,V., Fritts,L.,
	    Lifson,J.D. and Miller,C.J.
  TITLE     SIVmac251 is inefficiently transmitted to rhesus macaques by penile
	    inoculation with a single SIVenv variant found in ramp-up phase
	    plasma.
  JOURNAL   AIDS Res. Hum. Retroviruses. 27(12); 1259-69 (2011)
  PUBMED    21732792
REFERENCE   2 (bases 1 to 2179)
            Show all sequences for reference 2
  AUTHORS   Ma,Z.-M., Keele,B.F., Qureshi,H.J., Stone,M., Desilva,V., Fritts,L.
	    and Miller,C.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-FEB-2011) California National Primate Research
	    Center, University of California, Davis, One Sheilds Ave, Davis, CA
	    95616, USA
FEATURES             Location/Qualifiers
     source	     1..2179
		     /organism="Simian immunodeficiency virus"
		     /proviral="Simian immunodeficiency virus"
		     /mol_type="genomic DNA"
		     /isolate="251stx31"
		     /db_xref="taxon:11723"
     gene	     <1..>2179
		     /gene="env"
     CDS	     <1..>2179
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AEL89219.1"
		     /db_xref="GI:343131353"
		     /translation="ESFDAWENTVTEQAIEDVWQLFETSIKPCVKLSPLCITMRCNKS
		     ETDKWGLTKSSTTTTATPASTTRTTSAKIDMVNETSSCITHNNCTGLEQEQMISCKFN
		     MTGLKRDKKKEYNETWYSTDLVCEQGNSTDNESRCYMNHCNTSVIQESCDKHYWDTIR
		     FRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY
		     IYWHGRDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCW
		     FGGNWKDAIKEVKQTIVKHPRYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCK
		     MNWFLNWVEDRNLTLTTQKLRERHKRNYVPCHIRQIINTWHKVGKNVYLPPREGDLTC
		     NSTVTSLIANIDWTDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTDVKRYTT
		     GGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQLLDVVKRQ
		     QELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNASLTPDWN
		     NDTWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNSWDVFGNWFDLASWIRYI
		     QYGIYIVVGVILLRIVIYIVQMLAKLRQGYRPVFSSPPSYSQQIHTQQDPALPTREGK
		     EGDGGEGGGNSSWPWQIEYIHFLIRQLIRLLTWLFSNCRTLLSR"
BASE COUNT	728 a	 397 c	  511 g    543 t
ORIGIN
       1 gaaagctttg atgcttggga gaatacagtc acagaacagg caatagagga tgtatggcaa 
      61 ctctttgaga cctcaataaa gccttgtgta aaattatccc cattatgcat tactatgaga 
     121 tgcaataaaa gtgagacaga taaatgggga ttaacaaaat catcaacaac aacaacagca 
     181 acaccagcat caacaacaag gacaacatca gcaaaaatag acatggtcaa tgagactagt 
     241 tcttgtataa ctcataataa ttgcacaggc ttggaacaag agcaaatgat aagctgtaag 
     301 ttcaacatga cagggttaaa aagagacaag aaaaaggagt acaatgaaac ttggtactct 
     361 acagatttgg tttgtgaaca agggaatagc actgataatg aaagtagatg ctacatgaat 
     421 cactgtaaca cttctgttat ccaagagtct tgtgacaagc attattggga tactattaga 
     481 tttaggtatt gtgcacctcc aggttatgct ttgcttagat gtaatgacac aaattattca 
     541 ggctttatgc ctaaatgttc taaggtggtg gtctcttcat gcacaaggat gatggaaaca 
     601 cagacttcta cttggtttgg ctttaatgga actagagcag aaaatagaac ttatatttac 
     661 tggcatggta gagataatag gactataatt agtttaaata agtattataa tctaacaatg 
     721 aaatgtagaa gaccaggaaa taagacagtt ttaccagtca ccattatgtc tggattggtt 
     781 ttccactcac aaccaatcaa tgataggcca aagcaggcat ggtgttggtt tggaggaaat 
     841 tggaaggatg caataaaaga ggtgaagcag accattgtca aacatcccag gtatactgga 
     901 actaacaata ctgataagat caatttgacg gctcctagag gaggagatcc ggaagttacc 
     961 ttcatgtgga caaattgtag aggagaattt ctctactgta aaatgaattg gtttctaaat 
    1021 tgggtagaag ataggaatct aactctaact acccagaagc taagggaacg gcataaaagg 
    1081 aattacgtgc catgtcatat tagacaaata atcaacactt ggcataaagt aggcaaaaat 
    1141 gtttatttgc ctccaagaga gggagacctc acgtgtaact ccacagtgac cagtctcata 
    1201 gcaaacatag attggactga tggaaatcaa actaatatca ccatgagtgc agaggtggca 
    1261 gaactgtatc gattggaatt gggagattat aaattagtag agatcactcc aattggcttg 
    1321 gcccccacag atgtgaagag gtacactact ggtggcacct caagaaataa aagaggggtc 
    1381 tttgtgctag ggttcttggg ttttctcgca acggcaggtt ctgcaatggg cgcggcgtcg 
    1441 ttgacgctga ccgctcagtc ccggacttta ttggctggga tagtgcagca acagcaacag 
    1501 ctgttggacg tggtcaagag acaacaagaa ttgttgcgac tgaccgtctg gggaacaaag 
    1561 aacctccaga ctagggtcac tgccatcgag aagtacttaa aggaccaggc gcagctgaat 
    1621 gcttggggat gtgcgtttag acaagtctgc cacactactg taccatggcc aaatgcaagt 
    1681 ctaacaccag actggaacaa tgatacttgg caagagtggg agcgaaaggt tgacttcttg 
    1741 gaggaaaata taacggccct tctagaagag gcacaaattc aacaagagaa gaacatgtat 
    1801 gaattacaaa agttgaatag ctgggatgtg tttggcaatt ggtttgacct tgcttcttgg 
    1861 ataaggtata tacaatatgg aatttatata gttgtaggag taatactgtt aagaatagtg 
    1921 atctatatag tacaaatgct agctaagtta aggcaggggt ataggccagt gttctcttcc 
    1981 ccaccctctt attcccagca gatccatacc caacaggacc cggcactgcc aaccagagaa 
    2041 ggcaaagaag gagacggtgg agaaggcggt ggcaacagct cctggccttg gcagatagaa 
    2101 tatattcatt tcctgatccg ccaactgata cgcctcttga cttggctatt cagcaactgc 
    2161 agaaccttgc tatcgagag
//
last modified: Tue May 31 10:56 2022


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