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LOCUS JF298231 2179 bp DNA linear VRL 13-AUG-2011
DEFINITION Simian immunodeficiency virus isolate 251stx34 envelope
glycoprotein (env) gene, partial cds
ACCESSION JF298231
VERSION JF298231.1 GI:343131338
KEYWORDS .
SOURCE Simian immunodeficiency virus (SIV)
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2179)
Show all sequences for reference 1
AUTHORS Ma,Z.-M., Keele,B.F., Qureshi,H., Stone,M., Desilva,V., Fritts,L.,
Lifson,J.D. and Miller,C.J.
TITLE SIVmac251 is inefficiently transmitted to rhesus macaques by penile
inoculation with a single SIVenv variant found in ramp-up phase
plasma.
JOURNAL AIDS Res. Hum. Retroviruses. 27(12); 1259-69 (2011)
PUBMED 21732792
REFERENCE 2 (bases 1 to 2179)
Show all sequences for reference 2
AUTHORS Ma,Z.-M., Keele,B.F., Qureshi,H.J., Stone,M., Desilva,V., Fritts,L.
and Miller,C.J.
TITLE Direct Submission
JOURNAL Submitted (04-FEB-2011) California National Primate Research
Center, University of California, Davis, One Sheilds Ave, Davis, CA
95616, USA
FEATURES Location/Qualifiers
source 1..2179
/organism="Simian immunodeficiency virus"
/proviral="Simian immunodeficiency virus"
/mol_type="genomic DNA"
/isolate="251stx34"
/db_xref="taxon:11723"
gene <1..>2179
/gene="env"
CDS <1..>2179
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AEL89212.1"
/db_xref="GI:343131339"
/translation="ESFDAWENTVTEQAIEDVWQLFETSIKPCVKLSPLCITMRCNKS
ETDKWGLTKSSTTTTATPASTTRTTSAKIDMVNETSSCITHNNCTGLEQEQMISCKFN
MTGLKRDKKKEYNETWYSTDLVCEQGNSTDNESRCYMNHCNTSVIQESCDKHYWDTIR
FRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTY
IYWHGRDNRTIISLNKYYNLTMKCRRPGNKTVLPVTIMSGLVFHSQPINDRPKQAWCW
FGGNWKGAIKEVKQTIVKHPRYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCK
MNWFLNWVEDRNLTLTTQKLRERHKRNYVPCHIRQIINTWHKIGKNVYLPPREGDLTC
NSTVTSLIANIDWTDGNQTNITMSAEVAELYRLELGDYKLVEITPIGLAPTDVKRYTT
GGTSRNKRGVFVLGFLGFLATAGSAMGAASLTLTAQSRTLLAGIVQQQQQLLDVVKRQ
QELLRLTVWGTKNLQTRVTAIEKYLKDQAQLNAWGCAFRQVCHTTVPWPNAILTPDWN
NDTWQEWERKVDFLEENITALLEEAQIQQEKNMYELQKLNSWDVFGNWFDLASWIRYI
QYGIYIVVGVILLRIVIYIVQMLAKLRQGYRPVFSSPPSYSQQIHTQQDPALPTREGK
EGDGGESGGNSSWPWQIEYIHFLIRQLIRLLTWLFSNCRTLLSR"
BASE COUNT 727 a 398 c 511 g 543 t
ORIGIN
1 gaaagctttg atgcttggga gaatacagtc acagaacagg caatagagga tgtatggcaa
61 ctctttgaga cctcaataaa gccttgtgta aaattatccc cattatgcat tactatgaga
121 tgcaataaaa gtgagacaga taaatgggga ttaacaaaat catcaacaac aacaacagca
181 acaccagcat caacaacaag gacaacatca gcaaaaatag acatggtcaa tgagactagt
241 tcttgtataa ctcataataa ttgcacaggc ttggaacaag agcaaatgat aagctgtaag
301 ttcaacatga cagggttaaa aagagacaag aaaaaggagt acaatgaaac ttggtactct
361 acagatttgg tttgtgaaca agggaatagc actgataatg aaagtagatg ctacatgaat
421 cactgtaaca cttctgttat ccaagagtct tgtgacaagc attattggga tactattaga
481 tttaggtatt gtgcacctcc aggttatgct ttgcttagat gtaatgacac aaattattca
541 ggctttatgc ctaaatgttc taaggtggtg gtctcttcat gcacaaggat gatggagaca
601 cagacttcta cttggtttgg ctttaatgga actagagcag aaaatagaac ttatatttac
661 tggcatggta gagataatag gactataatt agtttaaata agtattataa tctaacaatg
721 aaatgtagaa gaccaggaaa taagacagtt ttaccagtca ccattatgtc tggattggtt
781 ttccactcac aaccaatcaa tgataggcca aagcaggcat ggtgttggtt tggaggaaat
841 tggaagggtg caataaaaga ggtgaagcag accattgtca aacatcccag gtatactgga
901 actaacaata ctgataagat caatttgacg gctcctagag gaggagatcc ggaagttacc
961 ttcatgtgga caaattgcag aggagagttt ctctactgta aaatgaattg gtttctaaat
1021 tgggtagaag ataggaatct aactctaact acccagaagc taagggaacg gcataaaagg
1081 aattacgtgc catgtcatat tagacaaata atcaacactt ggcataaaat aggcaaaaat
1141 gtttatttgc ctccaagaga gggagacctc acgtgtaact ccacagtgac cagtctcata
1201 gcaaacatag attggactga tggaaatcaa actaatatca ccatgagtgc agaggtggca
1261 gaactgtatc gattggaatt gggagattat aaattagtag agatcactcc aattggcttg
1321 gcccccacag atgtgaagag gtacactact ggtggcacct caagaaataa aagaggggtc
1381 tttgtgctag ggttcttggg ttttctcgca acggcaggtt ctgcaatggg cgcggcgtcg
1441 ttgacgctga ccgctcagtc ccggacttta ttggctggga tagtgcagca acagcaacag
1501 ctgttggacg tggtcaagag acaacaagaa ttgttgcgac tgaccgtctg gggaacaaag
1561 aacctccaga ctagggtcac tgccatcgag aagtacttaa aggaccaggc gcagctgaat
1621 gcttggggat gtgcgtttag acaagtctgc cacactactg taccatggcc aaatgcaatt
1681 ctaacaccag actggaacaa tgatacttgg caagagtggg agcgaaaggt tgacttcttg
1741 gaggaaaata taacggccct tctagaagag gcacaaattc aacaagagaa gaacatgtat
1801 gaattacaaa agttgaatag ctgggatgtg tttggcaatt ggtttgacct tgcttcttgg
1861 ataaggtata tacaatatgg aatttatata gttgtaggag taatactgtt aagaatagtg
1921 atctatatag tacaaatgct agctaagtta aggcaggggt ataggccagt gttctcttcc
1981 ccaccctctt attcccagca gatccatacc caacaggacc cggcactgcc aaccagagaa
2041 ggcaaagaag gagacggtgg agaaagcggt ggcaacagct cctggccttg gcagatagaa
2101 tatattcatt tcctgatccg ccaactgata cgcctcttga cttggctatt cagcaactgc
2161 agaaccttgc tatcgagag
//
last modified: Tue May 31 10:56 2022