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LOCUS HQ993622 1377 bp DNA linear VRL 07-NOV-2011
DEFINITION UNVERIFIED: HIV-1 isolate CP076301584 from Kenya genomic sequence
ACCESSION HQ993622
VERSION HQ993622.1 GI:355337471
KEYWORDS UNVERIFIED.
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1377)
Show all sequences for reference 1
AUTHORS Hamers,R.L., Wallis,C.L., Kityo,C., Siwale,M., Mandaliya,K.,
Conradie,F., Botes,M.E., Wellington,M., Osibogun,A., Sigaloff,K.C.,
Nankya,I., Schuurman,R., Wit,F.W., Stevens,W.S., Van Vugt,M. and de
Wit,T.F.
CONSRTM for PharmAccess African Studies to Evaluate Resistance (PASER)
TITLE HIV-1 drug resistance in antiretroviral-naive individuals in
sub-Saharan Africa after rollout of antiretroviral therapy: a
multicentre observational study
JOURNAL Lancet Infect Dis 11 (10), 750-759 (2011)
PUBMED 21802367
REFERENCE 2 (bases 1 to 1377)
Show all sequences for reference 2
AUTHORS Hamers,R.L., Wallis,C., Kityo,C., Siwale,M., Conradie,F.,
Mandaliya,K., Botes,M., Wellington,M., Osibigun,A.,
Sigaloff,K.C.E., Schuurman,R., Stevens,W.S., Van Vugt,M. and Rinke
de Wit,T.F.
CONSRTM PharmAccess African Studies to Evaluate Resistance (PASER)
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2011) Amsterdam Institute for Global Health and
Development, PharmAccess Foundation, Pietersbergweg 17, Amsterdam,
NH 1105BM, The Netherlands
REFERENCE 3
Show all sequences for reference 3
AUTHORS Hamers,R.L., Schuurman,R., Sigaloff,K.C.E., Wallis,C.L., Kityo,C.,
Siwale,M., Mandaliya,K., Ive,P., Botes,M.E., Wellington,M.,
Osibogun,A., Wit,F.W., Van Vugt,M., Stevens,W.S. and De Wit,T.F.R.
CONSRTM PASER
TITLE Effect of pretreatment HIV-1 drug resistance on immunological,
virological, and drug-resistance outcomes of first-line
antiretroviral treatment in sub-Saharan Africa: a multicentre
cohort study.
JOURNAL Lancet. Infect. Dis.. 12(4); 307-17 (2012)
PUBMED 22036233
COMMENT GenBank staff is unable to verify sequence and/or annotation
provided by the submitter.
FEATURES Location/Qualifiers
source 1..1377
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="CP076301584"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Kenya"
/note="collection date range 2007-2009"
BASE COUNT 531 a 220 c 303 g 309 t 14 other
ORIGIN
1 accagcagag atcttgggga tggggggaga gataacctcc cctccgaagc aggagcagaa
61 agacagggaa caggtccaac ccttagtttc cctcaaatca ctctttggca acgacccctt
121 gtcacagtaa gaataggaga acatctaaga gaagctctat tagatacagg agcagatgat
181 acagtgytag aagatataaa tttgccagga aaatggaagc caaaaatgat agggggaatt
241 ggaggtttta tcaaagtaag acagtatgat cagatamyta tagaaatttg tggaaaaaag
301 gctataggta cagtrttagt aggacctaca cctgtcaaca taattggaag raatatgttg
361 actcagattg gttgyacttt aaattttcca attagtccta ttgagactgt accagtaaaa
421 ttaaagccag gaatggatgg cccaagggtt aaacaatggc cattgacaga agaaaaaata
481 aaagcattaa cagaaatttg tggagagatg gaaaaggaag gaaaaatttc aaaaattggg
541 cctgaaaatc catacaatac tccagtattt gctataaaga aaaaagatag cactaaatgg
601 agaaaattag tagattttag agagctcaat aaaagaactc aagacttttg ggaggttcaa
661 ttagggatac cacacccagc agggttaaaa aagaaaaaat cagtaacagt actggatgtg
721 ggggatgcat atttttcagt tcctttagat gaaaacttta graaatatac tgcattcacc
781 ataccyagta taaacaatga gacaccagga atcagatatc agtacaatgt gctcccacag
841 ggatggaaag gatcaccagc aatattccag agtagcatga caaaaatctt agagcccttt
901 aggacamaaa acccagaaat agttatctat caatacatgg atgacttgta tgtaggatct
961 gatttagaaa tagggcagca tagaacaaaa atagargagt taagagaaca tctattgagg
1021 tggggattca ccacaccaga caagaaacat cagaaagaac ctccatttct gtggatgggg
1081 tatgaactcc atcctgacaa atggacagta cagcctatac wgytgccaga maaagaagac
1141 tggactgtca atgatataca gaagttagtg ggaaaattaa aytgggcaag tcagatttac
1201 tcagggatta aagtaaggca actgtgtaaa ctccttaggg gagccaaagc attaacagac
1261 atagtaccac tgactgaaga agcagaatta gaattggcag agaacaggga aattctaaaa
1321 gaaccagtat atggagtata ttatgaccca tcaaaagact taatagctga aatacag
//
last modified: Tue May 31 10:56 2022