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LOCUS HQ850727 105 bp RNA linear VRL 01-JAN-2012
DEFINITION HIV-1 isolate 1_P11 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION HQ850727
VERSION HQ850727.1 GI:359908002
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 105)
Show all sequences for reference 1
AUTHORS Kelley,C.F., Haaland,R.E., Patel,P., Evans-Strickfaden,T.,
Farshy,C., Hanson,D., Mayer,K., Lennox,J.L., Brooks,J.T. and
Hart,C.E.
TITLE HIV-1 RNA rectal shedding is reduced in men with low plasma HIV-1
RNA viral loads and is not enhanced by sexually transmitted
bacterial infections of the rectum.
JOURNAL J. Infect. Dis.. 204(5); 761-7 (2011)
PUBMED 21844302
REFERENCE 2 (bases 1 to 105)
Show all sequences for reference 2
AUTHORS Kelley,C.F., Haaland,R.E. and Hart,C.E.
TITLE Direct Submission
JOURNAL Submitted (06-JAN-2011) Division of HIV/AIDS Prevention, Laboratory
Branch, Centers for Disease Control and Prevention, 1600 Clifton
Rd, M/S A25, Atlanta, GA 30333, USA
FEATURES Location/Qualifiers
source 1..105
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="1_P11"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="USA"
/collection_date="11-Apr-2007"
/note="subtype: B"
gene <1..>105
/gene="env"
CDS <1..>105
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AEV90897.1"
/db_xref="GI:359908003"
/translation="CTRPSNNTRKSIHIAPGRSFYATGQIIGDIRQAHC"
BASE COUNT 46 a 17 c 21 g 21 t
ORIGIN
1 tgtacaagac ctagcaataa tacaagaaag agtatacata tagcaccagg gagatcattc
61 tatgcaacag ggcaaataat aggagatata agacaagcac attgt
//
last modified: Tue May 31 10:56 2022