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LOCUS HQ538979 582 bp DNA linear VRL 09-FEB-2011
DEFINITION HIV-1 isolate HM128 from Singapore envelope glycoprotein (env)
gene, partial cds
ACCESSION HQ538979
VERSION HQ538979.1 GI:321530639
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 582)
Show all sequences for reference 1
AUTHORS Ng,O.T., Munshaw,S., Lamers,S.L., Chew,K.K., Lin,L., Redd,A.D.,
Manucci,J., Quinn,T.C., Ray,S.C., Chua,A., Leo,Y.S. and
Laeyendecker,O.
TITLE Molecular epidemiology of HIV type 1 in Singapore and
identification of novel CRF01_AE/B recombinant forms.
JOURNAL AIDS Res. Hum. Retroviruses. 27(10); 1135-7 (2011)
PUBMED 21235306
REFERENCE 2 (bases 1 to 582)
Show all sequences for reference 2
AUTHORS Ng,O., Munshaw,S., Laeyendecker,O., Lamers,S., Chew,K., Lin,L.,
Redd,A., Gamaliel,J., Quinn,T., Ray,S., Chua,A. and Leo,Y.
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2010) School of Medicine, Johns Hopkins,
Baltimore, MD 21205, USA
FEATURES Location/Qualifiers
source 1..582
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="HM128"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Singapore"
/collection_date="2008"
/note="subtype: 01_AE"
gene <1..>582
/gene="env"
CDS <1..>582
/gene="env"
/note="gp120"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ADW94057.1"
/db_xref="GI:321530640"
/translation="KNVSSVQCTHGIKPVVSTQLLLIGSLSEGEIIIRSENLTDNAKT
IIVHLNKSVAITCTRPITKTRTSVRIPRGPGRAFYRTGDITGKIRQAYCVINATQWYG
VLSQVTNKLKKHFDNKNITFKPPAGGDPEITMHHFNCKGEFFYCNTTSLFNNSCTGAN
RERCGGTIILPCKIKQIINMWQGVGQAMYAPPIK"
BASE COUNT 233 a 106 c 109 g 134 t
ORIGIN
1 aaaaatgtca gctcagtaca atgcacacat ggaattaagc cagtagtatc aacacaattg
61 ctgttaattg gtagtctatc agaaggagag ataataatca gatctgaaaa tctcacagat
121 aatgccaaaa ccataatagt gcaccttaat aaatctgtag caatcacttg caccagaccc
181 atcaccaaga caagaacaag tgtacgtata ccaagaggac caggacgagc attctatcga
241 acaggagaca taacaggaaa aataagacaa gcatattgtg tgattaatgc aacacaatgg
301 tatggagttt taagtcaggt aactaacaaa ttaaaaaagc actttgataa taagaacata
361 acctttaaac caccagcagg aggagatcca gaaataacaa tgcatcattt taattgtaaa
421 ggggaatttt tctattgcaa tacaacatca ctgtttaata atagttgcac aggagcaaac
481 agagaaaggt gtggtggcac tatcatactt ccatgcaaga taaagcaaat tataaacatg
541 tggcagggag taggacaagc aatgtatgct cctcccatca ag
//
last modified: Tue May 31 10:56 2022