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LOCUS	    HQ537798		     850 bp    DNA     linear	VRL 16-NOV-2010
DEFINITION  HIV-1 clone EN_COT02c from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   HQ537798
VERSION     HQ537798.1 GI:312162890
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 850)
            Show all sequences for reference 1
  AUTHORS   Scaduto,D.I., Brown,J.M., Haaland,W.C., Zwickl,D.J., Hillis,D.M.
	    and Metzker,M.L.
  TITLE     Inaugural Article: Source identification in two criminal cases
	    using phylogenetic analysis of HIV-1 DNA sequences.
  JOURNAL   Proc Natl Acad Sci U S A. 2010 Nov 15.
  PUBMED    21078965
REFERENCE   2 (bases 1 to 850)
            Show all sequences for reference 2
  AUTHORS   Haaland,W.C. and Metzker,M.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-NOV-2010) Human Genome Sequencing Center, Baylor
	    College of Medicine, One Baylor Plaza, Houston, TX 77030, USA
FEATURES             Location/Qualifiers
     source	     1..850
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /clone="EN_COT02c"
		     /country="USA"
		     /collection_date="2004"
     gene	     <1..>850
		     /gene="env"
     CDS	     <1..>850
		     /gene="env"
		     /note="gp120"
		     /codon_start="2"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADQ37407.1"
		     /db_xref="GI:312162891"
		     /translation="IPKCRDKKFEGKGPCNNVNTVQCTHGIRPVVSTQLLLNGSLAEE
		     EVVIRSDNFTNNAKSIIVQLNESVEINCTRPSNNTRKGLHIGPGGAFYATGEVTGDIR
		     QAHCNISSEKWNNTLNQIVKKLREKFTNKTIVFTHSSGGDPEIVMHTFNCGGEFFYCN
		     LTQLFNSTWTTEGSNTTTYPNGTITLPCRIKQIINMWQEVGEAMYAPPIKGQIRCSSN
		     ITGLILTRDGGKNNITNDTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTQAKRR
		     VVQREKR"
BASE COUNT	348 a	 132 c	  176 g    194 t
ORIGIN
       1 gattccaaag tgtagagata agaagttcga aggaaaagga ccatgtaaca atgtcaacac 
      61 agtacaatgt acacatggaa ttaggccagt agtgtcaact caactgctgt taaatggcag 
     121 tctagcagaa gaagaggtag taattagatc tgacaatttc acaaacaatg ctaaaagcat 
     181 aatagtacag ctgaatgaat ctgtagaaat taattgtaca agacccagca acaatacaag 
     241 aaaaggtcta catataggac cagggggagc attttatgca acaggagaag taacaggaga 
     301 tataagacaa gcacattgta acattagtag tgaaaaatgg aataacactt taaatcagat 
     361 agttaaaaaa ttaagagaaa aatttactaa caaaacaata gtctttactc actcctcagg 
     421 aggggaccca gaaattgtaa tgcacacttt taattgtgga ggggagtttt tctactgtaa 
     481 tttaacacaa ctgtttaata gtacttggac tactgaagga tcaaatacaa caacttaccc 
     541 taatggaact attactctcc catgcagaat aaaacaaatt ataaacatgt ggcaggaggt 
     601 aggagaagca atgtatgccc ctcccatcaa aggacaaatt agatgttcat caaatattac 
     661 agggctgata ttaacaagag atggtggtaa gaacaacatt accaacgata cagagatctt 
     721 cagacctgga ggaggagata tgagggacaa ttggagaagt gaattatata aatataaagt 
     781 agtaaaaatt gaaccattag gagtagcacc cacccaggca aagagaagag tggtgcaaag 
     841 agaaaaaaga 
//
last modified: Tue May 31 10:56 2022


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