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LOCUS HQ528607 288 bp RNA linear VRL 29-NOV-2010
DEFINITION HIV-1 isolate 01003097 from USA pol protein (pol) gene, partial cds
ACCESSION HQ528607
VERSION HQ528607.1 GI:312603664
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 288)
Show all sequences for reference 1
AUTHORS Jain,V. and Spotts,G.
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2010) Medicine - SFGH - Positive Health Program,
University of California San Francisco (UCSF), 995 Potrero Avenue,
4th Floor, San Francisco, CA 94110, USA
REFERENCE 2
Show all sequences for reference 2
AUTHORS Jain,V., Sucupira,M.C., Bacchetti,P., Hartogensis,W., Diaz,R.S.,
Kallas,E.G., Janini,L.M., Liegler,T., Pilcher,C.D., Grant,R.M.,
Cortes,R., Deeks,S.G. and Hecht,F.M.
TITLE Differential Persistence of Transmitted HIV-1 Drug Resistance
Mutation Classes
JOURNAL J. Infect. Dis. 203 (8), 1174-1181 (2011)
PUBMED 21451005
FEATURES Location/Qualifiers
source 1..288
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="01003097"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="USA"
/collection_date="01-Jan-2001"
gene <1..>288
/gene="pol"
CDS <1..>288
/gene="pol"
/note="contains protease"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ADQ92917.1"
/db_xref="GI:312603665"
/translation="TLWQRPLVTVKIEGQLKEALLDTGADDTVLEEMNLPGRWKPKMI
GGIGGFIKVRQYDQIHIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT 106 a 44 c 67 g 71 t
ORIGIN
1 actctttggc aacgacccct cgtcacagta aagatagagg gacagctaaa ggaagcccta
61 ttagatacag gagcagatga tacagtatta gaagaaatga atttgccagg gagatggaaa
121 ccaaaaatga tagggggaat tggaggtttt atcaaagtaa gacagtatga tcagatacac
181 atagaaatct gtggacataa agctataggt acagtattag taggacctac acctgtcaac
241 ataattggaa gaaatctgtt gactcagatt ggttgcactt taaatttt
//
last modified: Tue May 31 10:56 2022