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LOCUS HQ426738 303 bp DNA linear VRL 08-AUG-2011
DEFINITION HIV-1 isolate RMR12220398 from Spain polyprotein (pol) gene,
partial cds
ACCESSION HQ426738
VERSION HQ426738.1 GI:342358367
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 303)
Show all sequences for reference 1
AUTHORS de,M., Yebra,G., Martin,L., Prieto,L., Mellado,M.J., Rojo,P.,
Munoz-Fernandez,M.A., Jimenez,d., Ramos,J.T. and Holguin,A.
TITLE Drug resistance prevalence and HIV-1 variant characterization in
the naive and pretreated HIV-1-infected paediatric population in
Madrid, Spain.
JOURNAL J Antimicrob Chemother. 2011 Aug 2.
PUBMED 21810838
REFERENCE 2 (bases 1 to 303)
Show all sequences for reference 2
AUTHORS De Mulder,M., Yebra,G., Martin,L., Holguin,A., Prieto,L.,
Mellado,M.J., Rojo,P. and Ramos,J.T.
TITLE Direct Submission
JOURNAL Submitted (21-OCT-2010) HIV-1 Molecular Epidemiology Laboratory,
Hospital Ramon y Cajal, Ctra. Colmenar Viejo Km 9.100, Madrid
28034, Spain
FEATURES Location/Qualifiers
source 1..303
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="RMR12220398"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Spain"
/collection_date="2002"
/note="subtype: B"
gene <1..>303
/gene="pol"
CDS <1..>303
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="polyprotein"
/protein_id="AEL29269.1"
/db_xref="GI:342358368"
/translation="PQITLWQRPLVSIKIGGQLKEALLDTGADDTCLEEMSLPGRWKP
KIIGGIGGFIKVRQYDQIPVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNXPI"
mat_peptide <1..297
/gene="pol"
/product="protease"
mat_peptide 298..>303
/gene="pol"
/product="reverse transcriptase"
BASE COUNT 109 a 50 c 65 g 77 t 2 other
ORIGIN
1 cctcaaatca ctctttggca acgacccctc gtctcaataa agataggggg acaactaaag
61 gaagccctat tagatacagg agcagatgat acatgtttag aagaaatgag tttgccagga
121 agatggaaac caaaaataat agggggaatt ggaggtttta taaaagtaag acagtatgat
181 cagatacctg tagaaatctg tggacataaa gctataggta cagtattaat aggacctaca
241 cctgtcaaca taattggaag raatctgttg actcagattg gttgcacttt aaatttsccc
301 att
//
last modified: Tue May 31 10:56 2022