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LOCUS	    HQ426738		     303 bp    DNA     linear	VRL 08-AUG-2011
DEFINITION  HIV-1 isolate RMR12220398 from Spain polyprotein (pol) gene,
	    partial cds
ACCESSION   HQ426738
VERSION     HQ426738.1 GI:342358367
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 303)
            Show all sequences for reference 1
  AUTHORS   de,M., Yebra,G., Martin,L., Prieto,L., Mellado,M.J., Rojo,P.,
	    Munoz-Fernandez,M.A., Jimenez,d., Ramos,J.T. and Holguin,A.
  TITLE     Drug resistance prevalence and HIV-1 variant characterization in
	    the naive and pretreated HIV-1-infected paediatric population in
	    Madrid, Spain.
  JOURNAL   J Antimicrob Chemother. 2011 Aug 2.
  PUBMED    21810838
REFERENCE   2 (bases 1 to 303)
            Show all sequences for reference 2
  AUTHORS   De Mulder,M., Yebra,G., Martin,L., Holguin,A., Prieto,L.,
	    Mellado,M.J., Rojo,P. and Ramos,J.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-OCT-2010) HIV-1 Molecular Epidemiology Laboratory,
	    Hospital Ramon y Cajal, Ctra. Colmenar Viejo Km 9.100, Madrid
	    28034, Spain
FEATURES             Location/Qualifiers
     source	     1..303
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="RMR12220398"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Spain"
		     /collection_date="2002"
		     /note="subtype: B"
     gene	     <1..>303
		     /gene="pol"
     CDS	     <1..>303
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="polyprotein"
		     /protein_id="AEL29269.1"
		     /db_xref="GI:342358368"
		     /translation="PQITLWQRPLVSIKIGGQLKEALLDTGADDTCLEEMSLPGRWKP
		     KIIGGIGGFIKVRQYDQIPVEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNXPI"
     mat_peptide     <1..297
		     /gene="pol"
		     /product="protease"
     mat_peptide     298..>303
		     /gene="pol"
		     /product="reverse transcriptase"
BASE COUNT	109 a	  50 c	   65 g     77 t      2 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccctc gtctcaataa agataggggg acaactaaag 
      61 gaagccctat tagatacagg agcagatgat acatgtttag aagaaatgag tttgccagga 
     121 agatggaaac caaaaataat agggggaatt ggaggtttta taaaagtaag acagtatgat 
     181 cagatacctg tagaaatctg tggacataaa gctataggta cagtattaat aggacctaca 
     241 cctgtcaaca taattggaag raatctgttg actcagattg gttgcacttt aaatttsccc 
     301 att
//
last modified: Tue May 31 10:56 2022


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