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LOCUS	    HQ377457		    2544 bp    RNA     linear	VRL 21-JAN-2011
DEFINITION  HIV-1 isolate subject_498_week20_clone 39 from Brazil envelope
	    glycoprotein (env) gene, complete cds
ACCESSION   HQ377457
VERSION     HQ377457.1 GI:317408029
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2544)
            Show all sequences for reference 1
  AUTHORS   McNicholas,P.M., Mann,P.A., Bsc,L.W., Phd,P.Q., Lee,E.,
	    McCarthy,M., Shen,J., Black,T.A. and Strizki,J.M.
  TITLE     Mapping and Characterization of Vicriviroc Resistance Mutations
	    From HIV-1 Isolated from Treatment-Experienced Subjects Enrolled in
	    a Phase II Study (VICTOR-E1).
  JOURNAL   J. Acquir. Immune Defic. Syndr.. 56(3); 222-9 (2011)
  PUBMED    21209592
REFERENCE   2 (bases 1 to 2544)
            Show all sequences for reference 2
  AUTHORS   McNicholas,P.M. and Strizki,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-OCT-2010) Department of Infectious Diseases, Merck,
	    2015 Galloping Hill Road, Kenilworth, NJ 07033, USA
FEATURES             Location/Qualifiers
     source	     1..2544
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="subject_498_week20_clone 39"
		     /host="Homo sapiens"
		     /db_xref="taxon:11676"
		     /country="Brazil"
		     /collection_date="Mar-2007"
     gene	     1..2544
		     /gene="env"
     CDS	     1..2544
		     /gene="env"
		     /note="gp160"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ADV17548.1"
		     /db_xref="GI:317408030"
		     /translation="MRAKETRKNYQHLWKWGMMLLGMLMICSAEEDKLWVTVYYGVPV
		     WKEATTTLFCASEAKAYDTEVHNVWATHACVPTDPSPHEQVLGNVTENFNMWKNNMVD
		     QMHEDIKSLWDQSLKPCVKLTPLCVTLNCSNYLRNATTTASTDMVGEIKNCSFNITTG
		     IGNKVKKEHALFNRFDIVKSDNDNTSHILVNCNTSVLTQACPKVSFEPIPIHYCAPAG
		     FAILKCSDPKFNGTGLCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVIIRSENITNN
		     AKTIIVQLNSSVVINCTRPNNNTRKSIHIGPGKAFYATGDIIGDIRQAHCNISSTAWN
		     NTLKKIVEKLREHFNKTIIFSPPVRGGDPEIVMHSFNCGGEFFYCNTSQLFNSTWNIN
		     GTWDDTGGERNITLPCRIRQIVNRWQEVGKAMYAPPIPGKITCRSNITGILLTRDGGG
		     TNNSHNETFRPGGGDMRDNWRSELYKYKVVSIEPLGIAPTKAKRRVVQREKRAVILGA
		     VFLGFLGAAGSTMGAAATALTVQARQLLSGIVQQQNNLLMAIEAQQHMLQLTVWGIKQ
		     LQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSKKTHDEIWQNMTWMQWER
		     EIDNYTDIIYGLLEKSQNQQEKNEQELLELDKWTSLWSWFDITNWLWYIKIFIMIVGG
		     LVGLRIVFTVLSIANRVRQGYSPLSFQTRLPARRGPDRPEGIEEGGGERDRDTSGYSA
		     SGFLTIIWVDLRSLCLFSYHRLRDLLLIAARIVELLGRRGWEALKYLWNLLQYWSQEL
		     KNSAISLLNTTAIAVGEGTDRIIEALQRAGRAILNIPRRIRQGLERALL"
BASE COUNT	887 a	 441 c	  601 g    615 t
ORIGIN
       1 atgagagcga aggagaccag gaagaattat cagcacttgt ggaaatgggg catgatgctc 
      61 cttgggatgt taatgatctg tagtgctgaa gaagacaaat tgtgggtcac agtttattat 
     121 ggagtacctg tgtggaaaga agcaaccacc actctatttt gtgcatcaga agctaaagca 
     181 tatgatacag aagtacataa tgtttgggcc acacatgcct gtgtacccac agaccctagc 
     241 ccacatgaac aagtattggg aaatgtgaca gaaaacttta acatgtggaa aaataacatg 
     301 gtagaccaga tgcatgaaga tataaagagt ttatgggatc aaagtttaaa gccatgtgta 
     361 aaattaactc cactctgtgt tactttaaat tgctctaatt atttgaggaa tgctacaact 
     421 accgccagta ctgacatggt gggagaaata aaaaactgct ctttcaatat cactacaggc 
     481 ataggaaaca aggtaaagaa agaacatgca ctttttaata gatttgatat agtaaaatca 
     541 gataatgata atacaagcca tatattggta aattgtaata cctcagtcct tacacaggcc 
     601 tgtccaaagg tatcctttga accaattccc atacattatt gtgccccggc tggttttgcg 
     661 attctaaagt gctctgatcc aaagttcaat ggaacaggac tatgtacaaa tgtcagcaca 
     721 gtacaatgta cacatggaat taggccagta gtatcaactc aattgctgct aaatggcagt 
     781 ttagcagaag aagaggtaat aattagatct gaaaatatca caaacaatgc taaaaccata 
     841 atagtacagc taaacagctc tgtagtaatt aactgtacaa gacccaataa caatacaaga 
     901 aaaagcatac atataggacc agggaaagca ttttatgcaa caggagacat aataggagat 
     961 ataagacaag cacattgtaa cattagtagc acagcttgga acaacacttt aaaaaagata 
    1021 gttgaaaaat taagagaaca ctttaataaa acaataatct ttagccctcc tgtcagagga 
    1081 ggggacccag aaattgtaat gcacagtttt aattgtggag gggagttttt ctactgcaat 
    1141 acatcacaac tgtttaatag tacttggaat attaatggta cttgggatga tactggagga 
    1201 gagcgaaata tcacactccc atgcagaata agacaaattg taaacagatg gcaagaagta 
    1261 ggaaaagcaa tgtatgcccc tcccatccca ggaaaaatta catgtagatc aaatattaca 
    1321 gggatactat taacaagaga tggtggtggc accaataata gccataatga aaccttcaga 
    1381 cctggaggag gagatatgag ggacaattgg agaagtgaat tatataaata taaagtagta 
    1441 agcattgaac cattaggaat agcacccacc aaggcaaaga gaagagtggt gcagagagag 
    1501 aaaagagcag tgatattagg agctgtgttc cttgggttct tgggagcagc aggaagcact 
    1561 atgggcgcag cggcaacagc gctgacggta caggccagac aattattgtc tggtatagtg 
    1621 caacagcaga acaatctgct gatggctatt gaggcgcaac agcatatgtt gcaactcaca 
    1681 gtctggggca tcaaacagct ccaagcaaga gtcctggctg tggaaagata cctaaaggat 
    1741 caacagctcc tggggatttg gggttgctct ggaaaactca tttgcaccac tgctgtgcct 
    1801 tggaatacta gttggagtaa gaaaactcat gatgaaatct ggcagaacat gacctggatg 
    1861 cagtgggaga gagaaataga caattacaca gacataatat atgggttact tgagaaatcg 
    1921 caaaaccaac aagaaaagaa tgaacaggaa ttattggaat tggataagtg gacaagtttg 
    1981 tggagttggt ttgacataac aaactggctg tggtatataa aaatattcat aatgatagta 
    2041 gggggcttag taggtttaag aatagttttt actgtacttt ctatagcgaa tagagttagg 
    2101 cagggatact caccattgtc gttccagacc cgcctcccag ccaggagggg acccgacagg 
    2161 cccgaaggaa tcgaagaagg aggtggagag agagacagag acacatccgg ttactcagcg 
    2221 agtggattct taacaatcat ctgggtcgat ctgcggagcc tgtgcctctt cagctaccat 
    2281 cgcttgagag acttactctt gattgcagcg aggattgtgg aacttctggg acgcaggggg 
    2341 tgggaagctc tcaagtactt gtggaatctc ctgcagtatt ggagccagga actaaagaat 
    2401 agtgctatta gcttgcttaa taccacagca atagcagtag gtgaggggac agatagaatt 
    2461 atagaagctt tgcaaagagc tggtagagct attctcaata tacctagaag aataagacag 
    2521 ggcttagaaa gggctttgct ataa
//
last modified: Tue May 31 10:56 2022


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